adaptions for release

Dockerfile

@@ -78,6 +78,7 @@ RUN apt-get update&&apt-get install -y --no-install-recommends r-cran-reticulate
 
 # install R packages
 RUN R -e 'install.packages(c("IRkernel", "rgdal", "sp", "raster", "sf", "basemaps", "ggplot2", "mapview", "mapedit", "devtools", "usethis", "testthat", "roxygen2", "geojsonio", "gdalUtils"))'
+RUN R -e 'devtools::install_github("eo2cube/odcr")'
 RUN R -e 'install.packages(c("IRkernel"))'
 
 # initiliaze R kernel for Jupyter

README.md

@@ -1,4 +1,4 @@
-# `eo2cube_box`
+# `odcbox`
 
 This repository hosts all you need to install an *Open Data Cube* instance as a docker container that serves a Jupyter notebook environment running a `Python` kernel and an `R` kernel. It is original based on the [Cube-in-a-box](https://github.com/opendatacube/cube-in-a-box) repository. 
 
@@ -25,7 +25,7 @@ Make sure to have [`docker`](https://docs.docker.com/engine/install/ubuntu/#inst
 Clone this repository to a directory of your choice, e.g. using
 
 ```
-git clone https://github.com/16EAGLE/eo2cube_box/
+git clone https://github.com/16EAGLE/odcbox/
 ```
 
 and `cd` into its main directory. To start the container (and build it the first time), run:
@@ -40,7 +40,7 @@ To initialize the jupyter environment and pull Sentinel-2A example data, open a
 ./docker_init
 ```
 
-Wait for its completion. You may then now access your local Jupyter environment in a browser on your host machine under [http://localhost](http://localhost). Use the password `secretpassword` to authenticate.
+Wait for its completion. You may now access your local Jupyter environment in a browser on your host machine under [http://localhost](http://localhost). Use the password `secretpassword` to authenticate.
 
 See the notebook `Sentinel_2.ipynb` for examples. Note that you can index additional areas using the `Indexing_More_Data.ipynb` notebook.
 
@@ -50,13 +50,13 @@ To stop the container, from a shell other then the one the docker container is r
 ./docker_stop
 ```
 
-To fully clean your docker environment from images pulled for `eo2cube_box` and to allow a fresh re-deploy, run
+To fully clean your docker environment from images pulled for `odcbox` and to allow a fresh re-deploy, run
 
 ```
 ./docker_clean
 ```
 
-before starting over. Note that with each re-deploy, a new docker volume is created containing your indexed data. You may want to prune your docker volumes from time to time, e.g. using `docker volume rm $(docker volume ls -q -f 'dangling=true')`. Note that this will remove **all** docker volumes, also those from other docker instances that might be running on your host system.
+before starting over. Note that with each re-deploy, a new docker volume is created containing your indexed data. You may want to prune your docker volumes for a re-deploy, e.g. using `docker volume rm $(docker volume ls -q -f 'dangling=true')`. Note that this will remove **all** docker volumes, also those from other docker instances that might be running on your host system.
 
 
 ## Troubleshooting
@@ -67,7 +67,7 @@ Error message:
 
 ```
 ./docker_start
-#> ERROR: for postgres  Cannot start service postgres: driver failed programming external connectivity on endpoint eo2cube_box_postgres_1 (...): Error starting userland proxy: listen tcp4 0.0.0.0:5432: bind: address already in use
+#> ERROR: for postgres  Cannot start service postgres: driver failed programming external connectivity on endpoint odcbox_postgres_1 (...): Error starting userland proxy: listen tcp4 0.0.0.0:5432: bind: address already in use
 ```
 
 Reason: The default `postgres` port `5432` seems to be used by some service (maybe `postgres`?) running on your host system.

docker-compose.yml

@@ -20,8 +20,6 @@ services:
       - DB_DATABASE=opendatacube
       - AWS_NO_SIGN_REQUEST=true
       - STAC_API_URL=https://earth-search.aws.element84.com/v0/
-    env_file:
-      - .github.env
     ports:
       - "80:8888"
       #- "8787:8787"