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University Medical Center, Mainz @imbeimainz
- Mainz
- https://federicomarini.github.io
- https://orcid.org/0000-0003-3252-7758
- @FedeBioinfo
- in/federico-marini
- @federicomarini.bsky.social
Highlights
- Pro
Stars
R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes
An R package built on RMarkdown to create biosketches (e.g. for NIH)
Analysis of cell-cell communication at single-cell resolution
A pdf-to-csv converter written in python
A checklist to help you avoid all those minor errors when submitting a scientific manuscript
Copy Functions from Other Packages Without Adding Them As Dependencies
An esoteric programming language, come se fosse antani.
📊 An infographics generator with 30+ plugins and 300+ options to display stats about your GitHub account and render them as SVG, Markdown, PDF or JSON!
The biggest collection of R books (and maybe later some other resources too)
⚡ Dynamically generated stats for your github readmes
A Visual Introduction to Hierarchical Modeling
Historic Tale Construction Kit - opensource and customizable version !
Resumes generated using the GitHub informations
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
satuRn is a highly performant and scalable method for performing differential transcript usage analyses.
R package implementing edge bundling algorithms
Ontology Tutorial
Iconic font aggregator, collection, & patcher. 3,600+ icons, 50+ patched fonts: Hack, Source Code Pro, more. Glyph collections: Font Awesome, Material Design Icons, Octicons, & more
Code repository for the Tumor Immune Cell Atlas (TICA) project
A repository for sharing information on available COVID-19 RNA-Seq datasets
Repository for the second edition of 'Data Science in Education Using R' by Emily A. Bovee, Ryan A. Estrellado, Joshua M. Rosenberg, and Isabella C. Velásquez
🎯 Human transcription factor target genes from 6 databases in convenient R format.
Examples of single-cell genomic analysis accelerated with RAPIDS