pcl_sample_consensus error #6

ubuntuslave · 2013-11-24T02:34:02Z

I tried getting rid of VTK 6, and recompiling Qt from HEAD, but I'm still getting this issue:

[ 11%] Building CXX object sample_consensus/CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-TJmy/macbuild/include -I/tmp/pcl-TJmy/common/include -I/tmp/pcl-TJmy/search/include -I/tmp/pcl-TJmy/sample_consensus/include    -o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o -c /tmp/pcl-TJmy/sample_consensus/src/sac_model_sphere.cpp
Linking CXX shared library ../lib/libpcl_sample_consensus.dylib
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_link_script CMakeFiles/pcl_sample_consensus.dir/link.txt --verbose=1
/usr/local/Library/ENV/4.3/clang++  -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -dynamiclib -Wl,-headerpad_max_install_names   -compatibility_version 1.7.0 -current_version 1.7.1 -o ../lib/libpcl_sample_consensus.1.7.1.dylib -install_name /tmp/pcl-TJmy/macbuild/lib/libpcl_sample_consensus.1.7.dylib CMakeFiles/pcl_sample_consensus.dir/src/sac.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_circle.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_circle3d.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_cylinder.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_cone.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_line.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_stick.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_parallel_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_sphere.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_registration.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o  -L/usr/local/lib/vtk-5.10 /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm ../lib/libpcl_common.1.7.1.dylib /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm -Wl,-rpath,/usr/local/lib/vtk-5.10 
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_symlink_library ../lib/libpcl_sample_consensus.1.7.1.dylib ../lib/libpcl_sample_consensus.1.7.dylib ../lib/libpcl_sample_consensus.dylib
/usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_progress_report /tmp/pcl-TJmy/macbuild/CMakeFiles  76 77 78
[ 11%] Built target pcl_sample_consensus
make: *** [all] Error 2
/usr/local/Library/Homebrew/formula.rb:615:in `system'
BuildError: Failed executing: make 
1. raise
2. ignore
3. backtrace
4. irb
5. shell
Choose an action:

Sorry for not having followed, I got a bit distracted by something else.

Carlos

The text was updated successfully, but these errors were encountered:

fran6co · 2013-11-24T02:39:48Z

@ubuntuslave, try to run brew update first, your pcl formula is old. I switched the formula to vtk5 instead, vtk6 is too unstable (PointCloudLibrary/pcl#363 needs to be merged).

ubuntuslave · 2013-11-24T03:10:57Z

vtk5-5.10.1 already installed and linked. I had removed vtk6 also (just in case).

I also tried these steps:

$ brew update
$ brew prune
$ brew cleanup
$ brew missing
$ brew doctor

$ brew install -vd pcl --HEAD --with-openni

but the error persists.

fran6co · 2013-11-24T03:15:46Z

If you removed vtk6 you shouldn't be getting that error, /usr/local/include/vtk-6.0/vtkPolyDataAlgorithm.h shouldn't exist anymore. Is it the same exact error or a bit different?

najlepsiwebdesigner · 2013-11-26T10:24:28Z

I've got the same error on my mac, was anybody able to solve this?

fran6co · 2013-11-26T11:36:34Z

@najlepsiwebdesigner, could you run it with the -vd flags and post the output here?

nizar-sallem · 2013-11-29T16:08:37Z

I believe this should be closed as it is VTK6 related.

fran6co · 2013-11-29T16:11:01Z

kind off, the current formula should work with vtk5. I couldn't reproduce the bug =/

nizar-sallem · 2013-11-29T16:46:13Z

I think what happened is that both versions got installed or may be VTK-6 was not completely removed and cmake found the version 6 first.

fran6co · 2013-11-29T16:51:23Z

That's what I thought but I got no confirmation from @najlepsiwebdesigner and @ubuntuslave.

I'm going to close this for now and wait for more feedback.

ubuntuslave · 2013-12-01T03:04:17Z

I tried getting rid of VTK 6, and recompiling Qt from HEAD, but I'm still getting this issue:

[ 11%] Building CXX object sample_consensus/CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-TJmy/macbuild/include -I/tmp/pcl-TJmy/common/include -I/tmp/pcl-TJmy/search/include -I/tmp/pcl-TJmy/sample_consensus/include    -o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o -c /tmp/pcl-TJmy/sample_consensus/src/sac_model_sphere.cpp
Linking CXX shared library ../lib/libpcl_sample_consensus.dylib
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_link_script CMakeFiles/pcl_sample_consensus.dir/link.txt --verbose=1
/usr/local/Library/ENV/4.3/clang++  -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -dynamiclib -Wl,-headerpad_max_install_names   -compatibility_version 1.7.0 -current_version 1.7.1 -o ../lib/libpcl_sample_consensus.1.7.1.dylib -install_name /tmp/pcl-TJmy/macbuild/lib/libpcl_sample_consensus.1.7.dylib CMakeFiles/pcl_sample_consensus.dir/src/sac.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_circle.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_circle3d.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_cylinder.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_cone.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_line.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_stick.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_parallel_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_normal_sphere.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_plane.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_registration.cpp.o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_sphere.cpp.o  -L/usr/local/lib/vtk-5.10 /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm ../lib/libpcl_common.1.7.1.dylib /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm -Wl,-rpath,/usr/local/lib/vtk-5.10 
cd /tmp/pcl-TJmy/macbuild/sample_consensus && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_symlink_library ../lib/libpcl_sample_consensus.1.7.1.dylib ../lib/libpcl_sample_consensus.1.7.dylib ../lib/libpcl_sample_consensus.dylib
/usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_progress_report /tmp/pcl-TJmy/macbuild/CMakeFiles  76 77 78
[ 11%] Built target pcl_sample_consensus
make: *** [all] Error 2
/usr/local/Library/Homebrew/formula.rb:615:in `system'
BuildError: Failed executing: make 
1. raise
2. ignore
3. backtrace
4. irb
5. shell
Choose an action:

Sorry for not having followed, I got a bit distracted by something else.

Carlos

fran6co · 2013-12-01T18:34:27Z

@ubuntuslave, could you paste a bit more of the build log? You didn't include the actual error that made make fail.

ubuntuslave · 2013-12-02T04:25:27Z

Hi, Francisco.

Sorry for not being thorough, I thought pasting the entire build log was kind of annoying, but here it goes, just in case you're able pin point where the actual error occurs. I noticed some early errors mentioning io/CMakeFiles/pcl_io.dir/all among other tests failing such as OpenMP_FLAG. It also says Could NOT find QVTK (missing: QVTK_LIBRARY QVTK_INCLUDE_DIR

Here is the entire log (stripped out the good things because of size issues in the post):

$ brew install -vd pcl --HEAD --with-openni

==> Writing /usr/local/lib/python2.7/site-packages/sitecustomize.py
==> Writing /usr/local/opt/python/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/distutils.cfg
==> Cloning https://github.com/PointCloudLibrary/pcl.git
git --git-dir /Library/Caches/Homebrew/pcl--git/.git status -s
Updating /Library/Caches/Homebrew/pcl--git
git config remote.origin.url https://github.com/PointCloudLibrary/pcl.git
git config remote.origin.fetch +refs/heads/master:refs/remotes/origin/master
git fetch origin
git checkout -f master
Already on 'master'
Your branch is up-to-date with 'origin/master'.
git reset --hard origin/HEAD
HEAD is now at b1edb0d Revert "Really only set CMAKE_CXX_FLAGS if empty on GCC"
git reset --hard origin/HEAD
HEAD is now at b1edb0d Revert "Really only set CMAKE_CXX_FLAGS if empty on GCC"
git checkout-index -a -f --prefix=/private/tmp/pcl-dr4h/
==> Patching
/usr/bin/patch -f -p1 -i 000-homebrew.diff
patching file cmake/Modules/FindQhull.cmake
Hunk #1 succeeded at 47 with fuzz 1.
patching file cmake/Modules/FindGLEW.cmake
==> cmake -DCMAKE_INSTALL_PREFIX=/usr/local/Cellar/pcl/HEAD -DCMAKE_BUILD_TYPE=None -DCMAKE_FIND_FRAMEWORK=LAST -DCMAKE_VERBOSE_MAKEFILE=ON -Wno-dev -DGLEW_INCLUDE_DIR=/usr/local/include/GL -DQHULL_ROOT=/usr/local/Cellar/qhull2011/2011.1 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_simulation:BOOL=AUTO_OFF -DBUILD_outofcore:BOOL=AUTO_OFF -DBUILD_people:BOOL=AUTO_OFF -DBUILD_apps=AUTO_OFF -DBUILD_apps_3d_rec_framework=AUTO_OFF -DBUILD_apps_cloud_composer:BOOL=OFF -DBUILD_apps_in_hand_scanner=AUTO_OFF -DBUILD_apps_modeler=AUTO_OFF -DBUILD_apps_optronic_viewer=AUTO_OFF -DBUILD_apps_point_cloud_editor=AUTO_OFF -DBUILD_examples:BOOL=OFF -DBUILD_global_tests:BOOL=OFF -DOPENNI_INCLUDE_DIR=/usr/local/include/ni ..
-- The C compiler identification is Clang 5.0.0
-- The CXX compiler identification is Clang 5.0.0
-- Check for working C compiler: /usr/local/Library/ENV/4.3/clang
-- Check for working C compiler: /usr/local/Library/ENV/4.3/clang -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/local/Library/ENV/4.3/clang++
-- Check for working CXX compiler: /usr/local/Library/ENV/4.3/clang++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Performing Test HAVE_MM_MALLOC
-- Performing Test HAVE_MM_MALLOC - Success
-- Performing Test HAVE_POSIX_MEMALIGN
-- Performing Test HAVE_POSIX_MEMALIGN - Success
-- Performing Test HAVE_SSE4_2_EXTENSIONS
-- Performing Test HAVE_SSE4_2_EXTENSIONS - Success
-- Performing Test HAVE_SSE4_1_EXTENSIONS
-- Performing Test HAVE_SSE4_1_EXTENSIONS - Success
-- Performing Test HAVE_SSE3_EXTENSIONS
-- Performing Test HAVE_SSE3_EXTENSIONS - Success
-- Performing Test HAVE_SSE2_EXTENSIONS
-- Performing Test HAVE_SSE2_EXTENSIONS - Success
-- Performing Test HAVE_SSE_EXTENSIONS
-- Performing Test HAVE_SSE_EXTENSIONS - Success
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [/openmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [-Qopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [-openmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [ ]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [-xopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [+Oopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [-qsmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP C flag = [-mp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [/openmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-Qopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-openmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [ ]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-xopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [+Oopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-qsmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Try OpenMP CXX flag = [-mp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Failed
-- Could NOT find OpenMP (missing:  OpenMP_C_FLAGS OpenMP_CXX_FLAGS) 
-- Not found OpenMP
-- Boost version: 1.55.0
-- Found the following Boost libraries:
--   system
--   filesystem
--   thread
--   date_time
--   iostreams
-- checking for module 'eigen3'
--   found eigen3, version 3.2.0
-- Found Eigen: /usr/local/include/eigen3  
-- Eigen found (include: /usr/local/include/eigen3)
-- checking for module 'flann>=1.7.0'
--   found flann, version 1.8.4
-- Found FLANN: /usr/local/lib/libflann_cpp.dylib (Required is at least version "1.7.0") 
-- FLANN found (include: /usr/local/include, lib: optimized;/usr/local/lib/libflann_cpp.dylib;debug;/usr/local/lib/libflann_cpp.dylib)
-- Found LIBUSB_1: /usr/local/lib/libusb-1.0.dylib  
-- checking for module 'libusb-1.0'
--   found libusb-1.0, version 1.0.9
-- Found USB_10: /usr/local/lib/libusb-1.0.dylib  
-- Found OpenNI: /usr/lib/libOpenNI.dylib  
-- OpenNI found (include: /usr/local/include/ni, lib: /usr/lib/libOpenNI.dylib)
-- Could NOT find FZAPI (missing:  FZAPI_LIBS FZAPI_INCLUDE_DIR) 
-- Could NOT find PXCAPI (missing:  PXCAPI_LIBS PXCAPI_INCLUDE_DIRS PXCAPI_LIB_DIRS) 
-- Found ZLIB: /usr/lib/libz.dylib (found version "1.2.5") 
-- Found PNG: /usr/local/lib/libpng.dylib (found version "1.5.17") 
-- Found Qhull: /usr/local/Cellar/qhull2011/2011.1/lib/libqhull6.dylib  
-- QHULL found (include: /usr/local/opt/qhull2011/include, lib: optimized;/usr/local/Cellar/qhull2011/2011.1/lib/libqhull6.dylib;debug;/usr/local/Cellar/qhull2011/2011.1/lib/libqhull6.dylib)
-- Setting CMAKE_HOST_COMPILER to /usr/bin/gcc instead of /usr/local/Library/ENV/4.3/clang.  See http://dev.pointclouds.org/issues/979
-- Found CUDA Toolkit v4.0
-- CUDA NVCC target flags: -gencode;arch=compute_20,code=sm_20;-gencode;arch=compute_20,code=sm_21
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/local/bin/qmake (found version "4.8.6") 
-- Could NOT find QVTK (missing:  QVTK_LIBRARY QVTK_INCLUDE_DIR) 
-- VTK found (include: /usr/local/include/vtk-5.10, lib: /usr/local/lib/vtk-5.10)
-- Found Doxygen: /usr/local/bin/doxygen (found version "1.8.5") 
-- Found PCAP: /usr/lib/libpcap.dylib  
-- Found OpenGL: /System/Library/Frameworks/OpenGL.framework  
-- Found Glew: /usr/local/lib/libGLEW.dylib;-framework Cocoa
-- Found Glew: /usr/local/lib/libGLEW.dylib;-framework Cocoa
-- Found GLUT: -framework GLUT  
-- DOXYGEN_FOUND YES
-- HTML_HELP_COMPILER 
-- checking for module 'sphinx-build'
--   package 'sphinx-build' not found
-- Found PythonInterp: /usr/local/bin/python (found version "2.7.6") 
-- Could NOT find Sphinx (missing:  SPHINX_EXECUTABLE) 
-- The following subsystems will be built:
--   common
--   octree
--   io
--   kdtree
--   search
--   sample_consensus
--   filters
--   2d
--   geometry
--   features
--   ml
--   segmentation
--   visualization
--   surface
--   registration
--   keypoints
--   tracking
--   recognition
--   stereo
--   apps
       building: 
       |_ 3d_rec_framework
       |_ in_hand_scanner
       |_ point_cloud_editor
       not building: 
       |_ cloud_composer: Cloud composer requires QVTK
       |_ modeler: VTK was not built with Qt support.
       |_ optronic_viewer: VTK was not built with Qt support.
--   outofcore
--   people
--   simulation
--   tools
-- The following subsystems will not be built:
--   examples: Code examples are disabled by default.
--   global_tests: Disabled by default.
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pcl-dr4h/macbuild
==> make
/usr/local/Cellar/cmake/2.8.12.1/bin/cmake -H/tmp/pcl-dr4h -B/tmp/pcl-dr4h/macbuild --check-build-system CMakeFiles/Makefile.cmake 0
/usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_progress_start /tmp/pcl-dr4h/macbuild/CMakeFiles /tmp/pcl-dr4h/macbuild/CMakeFiles/progress.marks
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/Makefile2 all
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f common/CMakeFiles/pcl_common.dir/build.make common/CMakeFiles/pcl_common.dir/depend
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f octree/CMakeFiles/pcl_octree.dir/build.make octree/CMakeFiles/pcl_octree.dir/depend
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f io/CMakeFiles/pcl_io_ply.dir/build.make io/CMakeFiles/pcl_io_ply.dir/depend
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f io/tools/CMakeFiles/pcl_pcd_convert_NaN_nan.dir/build.make io/tools/CMakeFiles/pcl_pcd_convert_NaN_nan.dir/depend
cd /tmp/pcl-dr4h/macbuild && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/pcl-dr4h /tmp/pcl-dr4h/octree /tmp/pcl-dr4h/macbuild /tmp/pcl-dr4h/macbuild/octree /tmp/pcl-dr4h/macbuild/octree/CMakeFiles/pcl_octree.dir/DependInfo.cmake --color=
cd /tmp/pcl-dr4h/macbuild && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/pcl-dr4h /tmp/pcl-dr4h/io /tmp/pcl-dr4h/macbuild /tmp/pcl-dr4h/macbuild/io /tmp/pcl-dr4h/macbuild/io/CMakeFiles/pcl_io_ply.dir/DependInfo.cmake --color=
cd /tmp/pcl-dr4h/macbuild && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/pcl-dr4h /tmp/pcl-dr4h/common /tmp/pcl-dr4h/macbuild /tmp/pcl-dr4h/macbuild/common /tmp/pcl-dr4h/macbuild/common/CMakeFiles/pcl_common.dir/DependInfo.cmake --color=
cd /tmp/pcl-dr4h/macbuild && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/pcl-dr4h /tmp/pcl-dr4h/io/tools /tmp/pcl-dr4h/macbuild /tmp/pcl-dr4h/macbuild/io/tools /tmp/pcl-dr4h/macbuild/io/tools/CMakeFiles/pcl_pcd_convert_NaN_nan.dir/DependInfo.cmake --color=
Scanning dependencies of target pcl_pcd_convert_NaN_nan
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Scanning dependencies of target pcl_octree
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cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/ml/include    -o CMakeFiles/pcl_ml.dir/src/point_xy_32f.cpp.o -c /tmp/pcl-dr4h/ml/src/point_xy_32f.cpp
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cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/ml/include    -o CMakeFiles/pcl_ml.dir/src/densecrf.cpp.o -c /tmp/pcl-dr4h/ml/src/densecrf.cpp
In file included from /tmp/pcl-dr4h/io/src/pcd_grabber.cpp:39:
In file included from /tmp/pcl-dr4h/io/include/pcl/io/pcd_grabber.h:52:
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/tmp/pcl-dr4h/io/include/pcl/io/openni_camera/openni.h:46:10: fatal error: 'XnOS.h' file not found
#include <XnOS.h>
         ^
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1 error generated.
make[2]: *** [io/CMakeFiles/pcl_io.dir/src/pcd_grabber.cpp.o] Error 1
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cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/ml/include    -o CMakeFiles/pcl_ml.dir/src/permutohedral.cpp.o -c /tmp/pcl-dr4h/ml/src/permutohedral.cpp
Linking CXX shared library ../lib/libpcl_kdtree.dylib
cd /tmp/pcl-dr4h/macbuild/kdtree && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_link_script CMakeFiles/pcl_kdtree.dir/link.txt --verbose=1
/usr/local/Library/ENV/4.3/clang++  -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -dynamiclib -Wl,-headerpad_max_install_names   -compatibility_version 1.7.0 -current_version 1.7.1 -o ../lib/libpcl_kdtree.1.7.1.dylib -install_name /tmp/pcl-dr4h/macbuild/lib/libpcl_kdtree.1.7.dylib CMakeFiles/pcl_kdtree.dir/src/kdtree_flann.cpp.o  -L/usr/local/lib/vtk-5.10 /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm ../lib/libpcl_common.1.7.1.dylib /usr/local/lib/libflann_cpp.dylib /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm -Wl,-rpath,/usr/local/lib/vtk-5.10 
cd /tmp/pcl-dr4h/macbuild/kdtree && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_symlink_library ../lib/libpcl_kdtree.1.7.1.dylib ../lib/libpcl_kdtree.1.7.dylib ../lib/libpcl_kdtree.dylib
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cd /tmp/pcl-dr4h/macbuild/sample_consensus && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/search/include -I/tmp/pcl-dr4h/sample_consensus/include    -o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_circle3d.cpp.o -c /tmp/pcl-dr4h/sample_consensus/src/sac_model_circle3d.cpp
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cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/ml/include    -o CMakeFiles/pcl_ml.dir/src/kmeans.cpp.o -c /tmp/pcl-dr4h/ml/src/kmeans.cpp
Linking CXX shared library ../lib/libpcl_ml.dylib
cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_link_script CMakeFiles/pcl_ml.dir/link.txt --verbose=1
/usr/local/Library/ENV/4.3/clang++  -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -dynamiclib -Wl,-headerpad_max_install_names   -compatibility_version 1.7.0 -current_version 1.7.1 -o ../lib/libpcl_ml.1.7.1.dylib -install_name /tmp/pcl-dr4h/macbuild/lib/libpcl_ml.1.7.dylib CMakeFiles/pcl_ml.dir/src/point_xy_32i.cpp.o CMakeFiles/pcl_ml.dir/src/point_xy_32f.cpp.o CMakeFiles/pcl_ml.dir/src/densecrf.cpp.o CMakeFiles/pcl_ml.dir/src/pairwise_potential.cpp.o CMakeFiles/pcl_ml.dir/src/permutohedral.cpp.o CMakeFiles/pcl_ml.dir/src/svm_wrapper.cpp.o CMakeFiles/pcl_ml.dir/src/svm.cpp.o CMakeFiles/pcl_ml.dir/src/kmeans.cpp.o  -L/usr/local/lib/vtk-5.10 /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm ../lib/libpcl_common.1.7.1.dylib /usr/local/lib/libboost_system-mt.dylib /usr/local/lib/libboost_filesystem-mt.dylib /usr/local/lib/libboost_thread-mt.dylib /usr/local/lib/libboost_date_time-mt.dylib /usr/local/lib/libboost_iostreams-mt.dylib -lm -Wl,-rpath,/usr/local/lib/vtk-5.10 
cd /tmp/pcl-dr4h/macbuild/ml && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_symlink_library ../lib/libpcl_ml.1.7.1.dylib ../lib/libpcl_ml.1.7.dylib ../lib/libpcl_ml.dylib
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cd /tmp/pcl-dr4h/macbuild/sample_consensus && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/search/include -I/tmp/pcl-dr4h/sample_consensus/include    -o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_cone.cpp.o -c /tmp/pcl-dr4h/sample_consensus/src/sac_model_cone.cpp
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[  9%] Building CXX object sample_consensus/CMakeFiles/pcl_sample_consensus.dir/src/sac_model_line.cpp.o
cd /tmp/pcl-dr4h/macbuild/sample_consensus && /usr/local/Library/ENV/4.3/clang++   -DEIGEN_USE_NEW_STDVECTOR -DEIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET -DPCLAPI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -Dqh_QHpointer -ftemplate-depth=1024 -Qunused-arguments -Wno-invalid-offsetof  -fPIC -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/ni -isystem /usr/local/Cellar/qt/4.8.5/include -F/usr/local/Cellar/qt/4.8.5/lib -isystem /usr/local/Cellar/qt/4.8.5/include/QtGui -isystem /usr/local/Cellar/qt/4.8.5/lib/QtCore.framework/Headers -I/tmp/pcl-dr4h/macbuild/include -I/tmp/pcl-dr4h/common/include -I/tmp/pcl-dr4h/search/include -I/tmp/pcl-dr4h/sample_consensus/include    -o CMakeFiles/pcl_sample_consensus.dir/src/sac_model_line.cpp.o -c /tmp/pcl-dr4h/sample_consensus/src/sac_model_line.cpp
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cd /tmp/pcl-dr4h/macbuild/sample_consensus && /usr/local/Cellar/cmake/2.8.12.1/bin/cmake -E cmake_symlink_library ../lib/libpcl_sample_consensus.1.7.1.dylib ../lib/libpcl_sample_consensus.1.7.dylib ../lib/libpcl_sample_consensus.dylib
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[ 11%] Built target pcl_sample_consensus
make: *** [all] Error 2
/usr/local/Library/Homebrew/formula.rb:615:in `system'
BuildError: Failed executing: make 
1. raise
2. ignore
3. backtrace
4. irb
5. shell
Choose an action:

fran6co · 2013-12-02T11:36:08Z

The problem is that it can't find the OpenNi headers for some reason. Could you check that /usr/local/include/ni/XnOS.h exist?

ubuntuslave · 2013-12-06T19:28:50Z

Thanks. Yes, openni was missing. It finished successfully after brewing openni. Maybe, you could add the dependency in the wiki, such as:

Tap the openni formula:

$ brew tap totakke/openni
$ brew update

In case it's necessary (libusb needs the universal flag):

$ brew rm libusb
$ brew install libusb --universal

Now try,

$ brew install openni

Install Sensor.

$ brew install sensor

Install NITE.

$ brew install nite

Run sample for test:

Connect a device to the PC and run a sample program.

$ cd `brew --cellar openni`/stable-1.5.2.23/sample/Bin/x64-Release
$ ./Sample-NiSimpleViewer

Cheers!

fran6co · 2013-12-06T19:30:07Z

Weird, the dependency is there maybe homebrew doesn't tap it automatically =/

ubuntuslave · 2013-12-07T04:18:18Z

Yeah. I don't think it's tapping it at all.

Carlos

On Dec 6, 2013, at 2:30 PM, "Francisco Facioni" <[email protected]mailto:[email protected]> wrote:

Weird, the dependency is there maybe homebrew doesn't tap it automatically =/

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/6#issuecomment-30021998.

fran6co closed this as completed Nov 29, 2013

fran6co reopened this Dec 2, 2013

ubuntuslave closed this as completed Dec 6, 2013

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pcl_sample_consensus error #6

pcl_sample_consensus error #6

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pcl_sample_consensus error #6

pcl_sample_consensus error #6

Comments

ubuntuslave commented Nov 24, 2013

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