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gaospecial · Dec 8, 2020 · 1574f66 · 1574f66
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Showing 14 changed files with 77 additions and 40 deletions.
diff --git a/figures/figure 1.tiff b/figures/figure 1.tiff
diff --git a/figures/figure 2.tiff b/figures/figure 2.tiff
diff --git a/figures/figure 3.tiff b/figures/figure 3.tiff
diff --git a/figures/figure 4.tiff b/figures/figure 4.tiff
diff --git a/figures/figure 5.tiff b/figures/figure 5.tiff
diff --git a/figures/figure 6.tiff b/figures/figure 6.tiff
diff --git a/figures/figure S2.tiff b/figures/figure S2.tiff
diff --git a/figures/figure S3.tiff b/figures/figure S3.tiff
diff --git a/figures/figure S4.tiff b/figures/figure S4.tiff
diff --git a/figures/figure S5.tiff b/figures/figure S5.tiff
diff --git a/figures/figure s1.tiff b/figures/figure s1.tiff
diff --git a/gene-expression.Rmd b/gene-expression.Rmd
@@ -20,7 +20,7 @@ knitr::opts_chunk$set(fig.width = 8,
                       fig.align = "center",
                       message = F)
 
-save_figure_to_ppt <- F
+save_figure_to_ppt <- T
 save_tiff <- T
 
 # 作图
@@ -139,7 +139,7 @@ plots <- lapply(seq_along(ref_group), function(i){
 plots <- unlist(plots,recursive = F)
 plot_grid(plotlist = plots,ncol=5,labels = "AUTO")
 
-if(save_figure_to_ppt) export::graph2ppt(file="figures.pptx",append=TRUE)
+if (save_figure_to_ppt) export::graph2ppt(file="figures.pptx",append=TRUE)
 if (save_tiff) ggsave("figure S1.tiff",path="figures")
 
 ```

diff --git a/gene-expression.html b/gene-expression.html
diff --git a/references.bib b/references.bib
@@ -14,20 +14,6 @@ @article{herbergDiagnosticTestAccuracy2016
 	langid = {en}
 }
 
-@article{herbergDiagnosticTestAccuracy2016,
-	title = {Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children},
-	author = {{Herberg}, {Jethro A.} and {Kaforou}, {Myrsini} and {Wright}, {Victoria J.} and {Shailes}, {Hannah} and {Eleftherohorinou}, {Hariklia} and {Hoggart}, {Clive J.} and {Cebey-López}, {Miriam} and {Carter}, {Michael J.} and {Janes}, {Victoria A.} and {Gormley}, {Stuart} and {Shimizu}, {Chisato} and {Tremoulet}, {Adriana H.} and {Barendregt}, {Anouk M.} and {Salas}, {Antonio} and {Kanegaye}, {John} and {Pollard}, {Andrew J.} and {Faust}, {Saul N.} and {Patel}, {Sanjay} and {Kuijpers}, {Taco} and {Martinón-Torres}, {Federico} and {Burns}, {Jane C.} and {Coin}, {Lachlan J. M.} and {Levin}, {Michael} and {for the IRIS Consortium}, {}},
-	year = {2016},
-	month = {08},
-	date = {2016-08-23},
-	journal = {JAMA},
-	pages = {835},
-	volume = {316},
-	number = {8},
-	doi = {10.1001/jama.2016.11236},
-	url = {http://jama.jamanetwork.com/article.aspx?doi=10.1001/jama.2016.11236},
-	langid = {en}
-}
 
 @article{loveModeratedEstimationFold2014,
 	title = {Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2},