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Improve AmiGO internal graph engine (visualize) with eye for more use in some cases #216

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kltm opened this issue Jun 11, 2015 · 1 comment
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Improve AmiGO internal graph engine (visualize) with eye for more use in some cases #216

kltm opened this issue Jun 11, 2015 · 1 comment
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bug (C: surface issue)
Milestone
2.4

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kltm commented Jun 11, 2015

Improvements need to be made to get the internal graph service functioning as desired again:

  • add relation subgraph as key
  • correct edge colors
@kltm kltm added this to the 2.3 milestone Jun 11, 2015
@kltm kltm changed the title Improve AmiGO internal graph engine with eye for more use in some cases Improve AmiGO internal graph engine (visualize) with eye for more use in some cases Jun 11, 2015
@kltm kltm mentioned this issue Jun 11, 2015
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@kltm kltm modified the milestones: 2.3, 2.4 Aug 26, 2015
@kltm kltm modified the milestones: 2.4, 2.5 Mar 2, 2016
@kltm kltm mentioned this issue Apr 15, 2016
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@kltm kltm modified the milestones: 2.4, 2.5 Apr 20, 2016
kltm added a commit that referenced this issue Apr 21, 2016
@kltm
remove old variable, make it easier to change default graph engine; w…
5b031f2 
…ork on #216 and #286
kltm added a commit that referenced this issue Apr 21, 2016
@kltm
add a context file for AmiGO (could be exportable into instance data …
df07555 
…sub-package); make sure that _dealias checks that first in Aid.pm, etc., work on #216
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kltm commented Apr 21, 2016

Well, colors are working again, from a YAML context in conf/. The legend looks terrible, and I don't really want to pursue this anymore in GraphViz in perl. I'd like to revisit the visualize in JS when the time comes.

@kltm kltm closed this as completed Apr 21, 2016
@kltm kltm mentioned this issue Dec 3, 2016
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