Update modules/local/add_found_in_tag/main.nf

Co-authored-by: Annick Renevey <[email protected]>
genomic-medicine-sweden · Jan 8, 2025 · 6cd933c · 6cd933c
1 parent 2c9b215
commit 6cd933c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/add_found_in_tag/main.nf b/modules/local/add_found_in_tag/main.nf
@@ -27,7 +27,7 @@ process ADD_FOUND_IN_TAG {
     def extension = args2.contains('--output-type b') || args2.contains('-Ob') ? 'bcf.gz' :
                     args2.contains('--output-type u') || args2.contains('-Ou') ? 'bcf' :
                     args2.contains('--output-type z') || args2.contains('-Oz') ? 'vcf.gz' :
-                    args2.contains("--output-type v") || args2.contains("-Ov") ? "vcf" :
+                    args2.contains('--output-type v') || args2.contains('-Ov') ? 'vcf' :
                     "vcf"
 
     """