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Run CI tests with latest-stable version of Nextflow #545

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merged 2 commits into from
Jan 24, 2025
Merged

Run CI tests with latest-stable version of Nextflow #545

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Run CI tests with latest-stable version of nextflow
fellen31 Jan 24, 2025
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Changelog
fellen31 Jan 24, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/ci.yml
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Expand Up @@ -33,7 +33,7 @@ jobs:
matrix:
NXF_VER:
- "24.04.2"
- "latest-everything"
- "latest-stable"
tags:
- "samplesheet"
- "samplesheet_multisample_bam"
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3 changes: 3 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -17,11 +17,14 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#536](https://github.com/genomic-medicine-sweden/nallo/pull/536) - Downgraded Sniffles from 2.0.7 to 1.0.12 due to missing calls
- [#535](https://github.com/genomic-medicine-sweden/nallo/pull/535) - Updated DeepVariant to 1.8.0 for SPRQ compatability
- [#541](https://github.com/genomic-medicine-sweden/nallo/pull/541) - Updated template to nf-core/tools version 3.1.2
- [#545](https://github.com/genomic-medicine-sweden/nallo/pull/545) - Changed CI to use `latest-stable` version of Nextflow instead of `latest-everything`

### `Removed`

### `Fixed`

- [#546](https://github.com/genomic-medicine-sweden/nallo/pull/546) - Fixed output filename descriptions in documentation not matching actual output

### Parameters

| Old parameter | New parameter |
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