In-silico gel electrophoresis visualization

• Take a dict of {samples : [DNA lengths list]}
• Migrate according to a reference ladder's DNA size: vertical displacement proportion (1kb+ only)
• assign samples to howevermany rows of length row_len
• Visualize hypothetical plot
• Could go downstream of PCR or restriction digestion simulation

Updates:

2025-01-13:

• Added 1kb+ band intensity (mass) to gel_plotly()
• Added example plotly png

2025-01-10:

• Tested some visualization alternatives and settled on Plotly.
• See ./plotly_eg.html
• Data generation detailed in plotly_eg.py.

Example plotly image

Requirements:

• numpy
• matplotlib
• plotly

shortcomings:

• band intensity is singular
• unusable standalone without some sequence parsing know-how