Code

Enable aggregate logic in flow#324

Code

Merged

bdice merged 38 commits intoglotzerlab:masterglotzerlab/signac-flow:masterfrom kidrahahjo:enable-aggregate-logickidrahahjo/signac-flow:enable-aggregate-logicCopy head branch name to clipboardAug 12, 2020

+316-194

Commits

Commits on Jul 15, 2020

• Add the private Aggregate class having fundamental concepts

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• Tests for _Aggregate class added

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• Logic for _condition, BaseFlowOperation, FlowGroup added

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• Logic extended for exec command

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• Logic extended for next command

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• Logic for run command

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• Logic for script command added

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Commits on Jul 16, 2020

• Logic for submit and status enabled

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• Make tests pass, replaced by-job grouping with by-op grouping

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• Style Fix

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• Remove print statement

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• Suggested changes implemented with refactoring of Aggregate class and FlowGroup

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Commits on Jul 17, 2020

• Documentation Edit and implement suggested changes

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Commits on Jul 18, 2020

• Improve status fetching performance

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• Use get_id() instead of the id property

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Commits on Jul 23, 2020

• Remove the use of Aggregate class and refactored

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• Resolve merge conflicts

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• Minute document change

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Commits on Jul 26, 2020

• Apply suggested changes

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• Merge upstream/master

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Commits on Jul 27, 2020

• Deprecate eligible and complete methods of Flow{Group|Operation}

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  a4f51e2

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• Add support with private class _JobOperation

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• Merge remote-tracking branch 'upstream/master' into enable-aggregate-logic

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Commits on Jul 28, 2020

• Move property method job to JobOperation only

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Commits on Jul 30, 2020

• Merge remote-tracking branch 'upstream/master' into enable-aggregate-logic

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Commits on Jul 31, 2020

• Apply suggested changes

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Commits on Aug 3, 2020

• Apply suggested changes

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Commits on Aug 10, 2020

• Apply suggested changes

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  6306c55

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• Change variable name

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• Insert assert statement to check len(_JobOperation._jobs) == 1

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  ba54b9c

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• Resolve merge conflicts

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  9181b27

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• Internally change the use to lists to tuples

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• Additional suggested changes from code review

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• Add suggested changes

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• Revert accidental changes

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Commits on Aug 11, 2020

• Use repr(job) instead of str(job) for __repr__ method and remove instance check

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• Use f-strings

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• Remove checks from run, submit, print_status, _generate_id methods. To be implemented in glotzerlab#336

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