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* Fixed coauthors examples in CUSTOMIZE * Fixed broken latex in _posts/2015-10-20-math.md (#2219) Latex math is currently broken in [_posts/2015-10-20-math.md](https://alshedivat.github.io/al-folio/blog/2015/math/) . Fixed it by replacing starts with underscore --------- Co-authored-by: George <[email protected]> * Emphasized more how the name of the repository must be * Add functionality to open external links in jupyter notebooks in new tab (#2233) See https://github.com/alshedivat/al-folio/pull/2230 --------- Co-authored-by: Scherrmann <[email protected]> * Update INSTALL.md (#2237) Added "Recommended Approach" as a subheading which was not under Installing , but was in the contents section. * Updated information about lsi * Correct config variable for enabling latest_posts on about page (#2243) I noticed disabling latest_posts in `_config.yml` didn't work because the variable in the liquid template was seemingly incorrect. This should fix that. --------- Co-authored-by: Jake Nabasny <[email protected]> * Replace `polyfill.io` (#2241) The PR replaces `polyfill.io` inside the template with `cdnjs.cloudflare.com/polyfill`. --- `polyfill.io` was acquired by **a China-based CDN company** "Funnull", see [the announcement from the `polyfill.io` domain owner's Twitter](https://x.com/JakeDChampion/status/1761315227008643367) and https://github.com/polyfillpolyfill/polyfill-service/issues/2834. Despite Funnull's claims of operating in the United States, the predominance of Simplified Chinese on its website suggests otherwise, and it turns out that **"Funnull" is notorious for providing service for the betting and pornography industries**. [The original creator of the `polyfill.io` has voiced his concern on Twitter](https://twitter.com/triblondon/status/1761852117579427975). And since the acquisition, numerous issues have emerged (https://github.com/polyfillpolyfill/polyfill-service/issues/2835, https://github.com/polyfillpolyfill/polyfill-service/issues/2838, https://github.com/alist-org/alist/issues/6100), rendering the `polyfill.io` service **extremely unstable**. Since then, Fastly ([Announcement](https://community.fastly.com/t/new-options-for-polyfill-io-users/2540)) and Cloudflare ([Announcement](https://blog.cloudflare.com/polyfill-io-now-available-on-cdnjs-reduce-your-supply-chain-risk)) has hosted their own instances of `polyfill.io` service. * Add option for local HTML files (#2245) Add option to link HTML local files from publications page. --------- Co-authored-by: Jake Nabasny <[email protected]> * Delete reports directory * Exclude more files from site (#2257) Signed-off-by: George Araujo <[email protected]> * Removed *.yml from _config.yml * Delete assets/img/pagespeed.svg * Make clear that you should not touch `gh-pages` branch * Make clear that you should not touch `gh-pages` branch * Update INSTALL.md * Added "follow system" option to theme toggle (#2261) The theme toggle button now has a third option, which follows the user's system preferences. - In the code there's now a distinction between the theme setting (which can be "dark", "light" or "system") and the computed theme. - The theme setting is now stored as the "theme-setting" local storage variable. Since this is different from the old variable ("theme"), this will effectively reset all current user themes to the default "system". Maybe this is not what you want. - The "system" theme icon is currently a half circle symbol. - The toggle button now displays the current theme setting, rather than the next theme setting (as far as I know this is consistent with other sites which have three theme options). - `theme.js` is now loaded regardless of `site.enable_darkmode`. This is because other scripts which were always loaded relied on being able to determine the theme. `theme.js` no longer initialises the theme itself though; this only happens when `site.enable_darkmode`. - When the theme setting is "system", the theme will change immediately whenever the user changes their system theme. #2261 --------- Signed-off-by: George Araujo <[email protected]> Co-authored-by: George Araujo <[email protected]> * fix links (#2278) This PR fixes/updates broken/outdated links on the `README.md` * Update INSTALL.md (#2285) Added a step to the "Recommended Approach" telling the user to wait for the GitHub Actions to be completed so that the gh-pages branch can be created. * Add academic community example (#2289) Adds [https://ztjona.github.io/](https://ztjona.github.io/) to the list of academic community examples. * add flickr to social integration (#2286) - add flickr to social integration --------- Co-authored-by: Yi Su <[email protected]> * Add academic community example (#2300) * Update FAQ.md with sqrt error message * Added permalink info to CUSTOMIZE.md * Added links to jekyll docs in CUSTOMIZE.md * Added post about why write a blog * Added Bluesky social (#2314) Now that Bluesky is [finally available](https://fontawesome.com/changelog) at Font Awesome, we can add it to the template. --------- Signed-off-by: George Araujo <[email protected]> * Remove bootstrap-table from archive tables (#2306) The blog archive page tables have `table-borderless`, but bootstrap-table JS adds `table-bordered` by default and this forces an `!important` border. Since these tables are also supposed to be borderless, this PR excludes them from bootstrap-table, just like the news and CV table are. * Update README.md with deployment word * feat: added IEEE and ACM social (#2321) I added further social integration for: 1. ACM: https://dl.acm.org/profile/ 2. IEEE: https://ieeexplore.ieee.org/author/ Given their importance in computer science, I would like to have them in al-folio. * Feature: added "award" for publications (#2324) This PR adds an "award" button to publications. It takes the `award` value from the bibtex entry and displays(incl. Markdown rendering) the text in a box similarly to abstract and bibtex. User can set the entry `award_name` to configure the value. See example config with `award_name: Nobel Prize`. The color of the award box can be configured in `_base.scss`. Note, there is a similar PR #2175, it I saw to issues with: 1. There was no progress 2. The award button just prints the text directly in the button, similarly to `award_name`. Long award names could clutter the webpage. 3. IMHO, it brokes the current al-folio design, since butons do have a fixed size/text. However, variable prize names are also possible with this PR. *** Pictures: Default. Text are hidden: <img width="708" alt="grafik" src="https://github.com/alshedivat/al-folio/assets/1998723/1221c82c-c384-4297-807e-39385e2ce4fd"> Additional info is shown when the button is clicked. Markdown supported. <img width="684" alt="grafik" src="https://github.com/alshedivat/al-folio/assets/1998723/2354aeee-12b0-4d32-b194-5d2ea80d8363"> Only one text box shown at the same time, like it is with "ABS" and "BIB": <img width="691" alt="grafik" src="https://github.com/alshedivat/al-folio/assets/1998723/d3937bb9-d9c2-47ac-b819-b92aec3d916a"> *** Feedback welcome. You can also check [my website](https://christianmainka.de/publications/awarded), which was the base for this PR. * Offline mode (closes #1181) (#2312) Created a plugin to tackle #1181. Currently have an issue with tikzjax since it imports some wasm file from its javascript. The rest should work as expected. --------- Signed-off-by: George Araujo <[email protected]> * Use JEKYLL_ENV=development in Docker Compose setup (#2336) Fixes #2303. See #2333 for discussion. * feat: bib -> acceptance, acceptance_rate, location, cve_score (#2325) I added further filds to `bib.liquid`. A common field is `location`, which is now printed. I added fields for `acceptance` and `acceptance_rate`. These fields might be usefull for external people to better determine a vanue's quality. `acceptance` is used for the accepted vs submitted papers. `acceptance_rate` is a percent-value. <img width="785" alt="Bildschirmfoto 2024-04-07 um 18 11 49" src="https://github.com/alshedivat/al-folio/assets/1998723/d5eaeb08-7f67-4fb7-b9b9-fd5f4a3c331c"> The existence of two distinct variables stems from the fact that the 'acceptance_rate' is represented using the venue color. On my website, I employ venue colors correlated with computer science conference rankings, which naturally leads to associating the acceptance rate with the same color scheme for coherence and better understanding. <img width="785" alt="Bildschirmfoto 2024-04-07 um 18 14 54" src="https://github.com/alshedivat/al-folio/assets/1998723/33ef0419-00ee-4fea-93d9-18c0269188de"> You can find more examples on my [website](https://christianmainka.de/publications/peerreviewed). Also, I added a CVE Score, which is mainly usefull for IT-Security researchers, see this [example](https://christianmainka.de/cve/). *** Let me know what you think about this proposal. * Update FAQ.md with layout error information * Added `pseudocode.js` support (#2344) Signed-off-by: George Araújo <[email protected]> * feat: make video embeddings optional. (#2337) As discussed in #1181, I suggest to make embedding videos an optional feature. This behavior aligns well with recently merged PR #2312. Open questions: 1. I added a youtube link to `papers.bib`. Is this link okay? 2. I set `enable_video_embedding: false` as the default. I argue that privacy settings should be the default. Also, the current implementation of `video.liquid` only works for some very specific video URLs. For example, to embed youtube, specialized links must be used to avoid `X-Frame-Option` issues. This behavior can lead to a broken embedding, which would not look very nice. Feedback welcome. * feat: vscode devcontainer (#2335) I added a [Remote Development Containers](https://code.visualstudio.com/docs/devcontainers/tutorial) in Visual Studio Code (VSCode). Lots of people like to develop in Containers to have a clean system. With this PR, it is possible to work with al-folio without any installation (except for VS Code, its Remote Dev Container extension, and Docker). Once you've opened the `al-folio` repository, a prompt will appear requesting to reopen the project within a container. <img width="541" alt="grafik" src="https://github.com/alshedivat/al-folio/assets/1998723/2963446f-8e42-4df1-9e8c-22691d78b7e4"> Upon doing so, Jekyll will automatically start within the container and prompt you to open the website's preview sidebar directly in VSCode or using your Browser. Additionally, it installs extensions for `liquid` and Prettier (`npx prettier`). Files are formatted using `al-folios`-prettier settings (`.prettierrc`) to streamline pull request submission. Additionally, the performance seems to be much better compared to the `docker-compose`setup, see #2333. --------- Co-authored-by: George <[email protected]> * New website using al-folio added to README.md (#2345) * Update work.liquid to show the location of work experience under cv page (#2298) adding "location" element when location object is added to work experience. Location icon and the entered value will appear on the CV page under the work experience section. This feature already exists for education section, but not for work. The change is made to make the experiece more consistent.  * adding null check to external-posts.rb to avoid parsing failure (#2347) Adjusting issue #2343 by adding null check. * Fix docker compose command using the slimmed docker image (#2351) Fixing the docker command based on `docker compose [-f <arg>...] [options] [COMMAND] [ARGS...]` format on the [website](https://docs.docker.com/compose/reference/#command-options-overview-and-help). Because the old command would give error: `unknown shorthand flag: 'f' in -f` * Update CONTRIBUTING.md with prettier information * Fixed reference to commit in CONTRIBUTING.md * Update CONTRIBUTING.md * Update work.liquid to show the location of work experience under cv … (#2349) …page same as pull request https://github.com/alshedivat/al-folio/pull/2298 and commit https://github.com/alshedivat/al-folio/commit/363f277aa82df6e03f172dbcf2f9c1fbe84aca26 for **Volunteer** section * Feat bib preview (closes #1162) (#2352) This PR enables to have `abbr` and `preview` for a single publication (closing #1162). The following example shows all three possibilities: 1) Preview + Abbr 2) Preview only 3) Abbr only. <img width="786" alt="grafik" src="https://github.com/alshedivat/al-folio/assets/1998723/0633f443-b430-4fa6-a0eb-750170a638bd"> * Feat reworked project layout (closing #2246) (#2357) The current state of project looks a bit unharmonized. # Vertical layout before: <img width="834" alt="Bildschirmfoto 2024-04-20 um 18 09 16" src="https://github.com/alshedivat/al-folio/assets/1998723/55ba0968-bfd9-443f-b58a-eb6723deccfc"> # Vertical layout after: <img width="834" alt="Bildschirmfoto 2024-04-20 um 18 10 28" src="https://github.com/alshedivat/al-folio/assets/1998723/9b06b9b8-9228-4dfd-ab10-ca16ce028b1d"> # Horizontal layout before: <img width="834" alt="Bildschirmfoto 2024-04-20 um 18 08 54" src="https://github.com/alshedivat/al-folio/assets/1998723/97aaf5b4-1d3e-4a1c-8175-3a97391739b3"> # Horizontal layout after: <img width="834" alt="Bildschirmfoto 2024-04-20 um 18 07 46" src="https://github.com/alshedivat/al-folio/assets/1998723/a357fa62-8551-4e92-91d3-3d5d01dbc605"> *** These improvements are not perfect, but to be honest, I have no deep experiences with bootstrap. Actually, I just read the [docs](https://getbootstrap.com/docs/4.4/components/card/) and tried my best. But I think it looks way better than before. I'm pretty happy with the vertical layout, but the horizontal could be improved. I tried various things to get a better alignment of the image, without any success. In theroy, there is e.g. `card-img-top`, but I could not make it work. I changed the project descriptions to make some of these edge-cases visible. Feedback and improvements (especially code) are more than welcome Closes #2246 * Fixed security issue with download 3rd party plugin (#2364) Signed-off-by: George Araujo <[email protected]> * Fixed security issue with download 3rd party plugin (#2365) Added condition to avoid security issue according to GitHub's dependabot  --------- Signed-off-by: George Araujo <[email protected]> * add last updated date to posts (#2341) This PR is related to #2309. I added an optional `last_updated` field. This new field represents the timestamp for when the post was last updated. Consequently, the existing `date` metadata should now be interpreted as the creation date of the post. The formatting for displaying these dates has been standardized as follows: ```text Created: July 11, 2023 | Last Updated: April 14, 2024 ``` For a practical implementation example, please refer to [this post](https://torydeng.github.io/blog/2023/deploying-server/) on my website, where I have applied these changes. --- Any feedback is wellcome. * Set user agent for lychee (#2368) See: https://github.com/alshedivat/al-folio/discussions/2366 See: https://github.com/lycheeverse/lychee/issues/1411 * Fix bib preview mobile (#2359) [Reference](https://github.com/alshedivat/al-folio/pull/2352#issuecomment-2067965077) I'm not sure if the removal of `max-width: 90vw;` for all images causes any side issues. I could at least not find any. But having this properties will produce unaligned preview sizes. Help/testing is more than welcome. # Before <img width="364" alt="Bildschirmfoto 2024-04-21 um 14 17 51" src="https://github.com/alshedivat/al-folio/assets/1998723/5ad1a4d7-dfe6-43f8-98ec-eae19dd991c2"> # After <img width="364" alt="Bildschirmfoto 2024-04-21 um 14 21 53" src="https://github.com/alshedivat/al-folio/assets/1998723/fb942403-a01f-42ec-95c6-697378ed0d92"> ... <img width="364" alt="Bildschirmfoto 2024-04-21 um 14 22 03" src="https://github.com/alshedivat/al-folio/assets/1998723/1ddf43d8-98a8-421d-9f64-3352190c4bb8"> * Added post citation (#2377) Basically adds suggestions of how to cite a post, as suggested in #2374.  --------- Signed-off-by: George Araujo <[email protected]> * fix(style): remove whitespace before comma (#2378) This PR fixes a very niche bug. If there is a co-author that is not *me* (=`<em>` tagged) and does not have a `coauthor_url` (=`<a>` tagged), there will be a leading whitespace before the separating comma. If the author list is split into multiple lines (due to long author lists or a small view), the whitespace can lead to a line beginning with a comma. As I said, very niche, but interestingly, the other cases already did the same whitespace handling. Just the case not-me/no-url was mising. Currently, we do not have this case on vanilla al-folio, but you can see it for example on [my website](https://christianmainka.de/publications/) if the view is small (e.g., 430px). Related to #1502. * Added support for Google Typograms (#2379) Google [Typograms](https://github.com/google/typograms/) is a lightweight image format (text/typogram) useful for defining simple diagrams in technical documentation.   --------- Signed-off-by: George Araujo <[email protected]> * Added support for jekyll-tabs (#2380) Added support for [jekyll-tabs](https://github.com/Ovski4/jekyll-tabs), implemented #1977. Light:  Dark:  --------- Signed-off-by: George Araujo <[email protected]> * Added website link to README, Academics (#2388) I've added my al-folio themed website link to the README's Academic websites section. * Add Gemfile.lock (#2390) * Updated docker slim action * Fix dependency (#2396) * Fixed card padding bottom * Fix docker image building (#2400) This PR should fix the issues reported in https://github.com/alshedivat/al-folio/issues/2384 , https://github.com/alshedivat/al-folio/issues/2392 and https://github.com/alshedivat/al-folio/issues/2395. It seems that the ruby docker image is not affected by these problems. * Updated dependencies (#2402) Signed-off-by: George Araujo <[email protected]> * Added information about GitHub workflows to FAQ (#2404) Signed-off-by: George Araujo <[email protected]> * Added prettier link to FAQ * Fixed typo in pagination.liquid * Fixed link to last FAQ question * Bump nokogiri from 1.16.4 to 1.16.5 (#2417) Bumps [nokogiri](https://github.com/sparklemotion/nokogiri) from 1.16.4 to 1.16.5. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/sparklemotion/nokogiri/releases">nokogiri's releases</a>.</em></p> <blockquote> <h2>v1.16.5 / 2024-05-13</h2> <h3>Security</h3> <ul> <li>[CRuby] Vendored libxml2 is updated to address CVE-2024-34459. See <a href="https://github.com/sparklemotion/nokogiri/security/advisories/GHSA-r95h-9x8f-r3f7">GHSA-r95h-9x8f-r3f7</a> for more information.</li> </ul> <h3>Dependencies</h3> <ul> <li>[CRuby] Vendored libxml2 is updated to <a href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.12.7">v2.12.7</a> from v2.12.6. (<a href="https://github.com/flavorjones"><code>@flavorjones</code></a>)</li> </ul> <hr /> <p>sha256 checksums:</p> <pre><code>af0f44fa3e664dfb2aa10de8b551447d720c1e8d1f0aa3f35783dcc43e40a874 nokogiri-1.16.5-aarch64-linux.gem 23dc2357b26409a5c33b7e32a82902f0e9995305420f16d1a03ab3ea1a482fec nokogiri-1.16.5-arm-linux.gem 950d037530edb49f75ad35de0b8038b970a7dda57e2b6326895b0e49fadf6214 nokogiri-1.16.5-arm64-darwin.gem b7aefc94370c62476b8528e8d8abb6160203abd84a1f4eceda8f1aa8974d9989 nokogiri-1.16.5-java.gem ec2167160df8fec3137bf95d574ed80ebc1d002bb3b281546b60b4aa9002466e nokogiri-1.16.5-x64-mingw-ucrt.gem 6984200491fac69974005ecfa2de129d61843d345eafa5d6f58e8b908d1cf107 nokogiri-1.16.5-x64-mingw32.gem abdc389ab1ec6604492da16bd9d06ad746fdb6bd6a1bd274c400d61ffcadb3c4 nokogiri-1.16.5-x86-linux.gem 63d24981345856f2baf7f4089870a62d3042fb8d3021b280fb04fc052532e3c4 nokogiri-1.16.5-x86-mingw32.gem 71b5f54e378c433d13df67c3b71acc4716129da62402d8181f310c4216a63279 nokogiri-1.16.5-x86_64-darwin.gem 0ca238da870066bed2f7837af6f35791bb9b76c4c5638999c46aac44818a6a97 nokogiri-1.16.5-x86_64-linux.gem ec36162c68984fa0a90a5c4ae7ab7759460639e716cc1ce75f34c3cb54158ad2 nokogiri-1.16.5.gem </code></pre> </blockquote> </details> <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/sparklemotion/nokogiri/blob/main/CHANGELOG.md">nokogiri's changelog</a>.</em></p> <blockquote> <h2>v1.16.5</h2> <h3>Security</h3> <ul> <li>[CRuby] Vendored libxml2 is updated to address CVE-2024-34459. See <a href="https://github.com/sparklemotion/nokogiri/security/advisories/GHSA-r95h-9x8f-r3f7">GHSA-r95h-9x8f-r3f7</a> for more information.</li> </ul> <h3>Dependencies</h3> <ul> <li>[CRuby] Vendored libxml2 is updated to <a href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.12.7">v2.12.7</a> from v2.12.6. (<a href="https://github.com/flavorjones"><code>@flavorjones</code></a>)</li> </ul> </blockquote> </details> <details> <summary>Commits</summary> <ul> <li><a href="https://github.com/sparklemotion/nokogiri/commit/cd70bd3dc9e0dc15b04b42d67b639eb5804e77d5"><code>cd70bd3</code></a> version bump to v1.16.5</li> <li><a href="https://github.com/sparklemotion/nokogiri/commit/afc36de553085b6b397b23a0c09a2449655a3a47"><code>afc36de</code></a> dep: update vendored libxml2 to v2.12.7 (<a href="https://redirect.github.com/sparklemotion/nokogiri/issues/3191">#3191</a>)</li> <li><a href="https://github.com/sparklemotion/nokogiri/commit/41b4f0846d2c264b48ef93ecd034dd230ab8125a"><code>41b4f08</code></a> ci: add arm64-darwin coverage using macos-14</li> <li><a href="https://github.com/sparklemotion/nokogiri/commit/67b9e863a67164ae6ffbe5ed4cc482267db7c436"><code>67b9e86</code></a> dep: update libxml2 to v2.12.7</li> <li>See full diff in <a href="https://github.com/sparklemotion/nokogiri/compare/v1.16.4...v1.16.5">compare view</a></li> </ul> </details> <br /> [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting `@dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- <details> <summary>Dependabot commands and options</summary> <br /> You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show <dependency name> ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) You can disable automated security fix PRs for this repo from the [Security Alerts page](https://github.com/alshedivat/al-folio/network/alerts). </details> Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Fix offline leaflet (#2420) Fixes #2419 by downloading leaflet images. Also changed the path where the libraries are downloaded to avoid not downloading files with same name. --------- Signed-off-by: George Araujo <[email protected]> * Changing Gemfile now triggers page build * Bump rexml from 3.2.6 to 3.2.8 (#2423) Bumps [rexml](https://github.com/ruby/rexml) from 3.2.6 to 3.2.8. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/ruby/rexml/releases">rexml's releases</a>.</em></p> <blockquote> <h2>REXML 3.2.8 - 2024-05-16</h2> <h3>Fixes</h3> <ul> <li>Suppressed a warning</li> </ul> <h2>REXML 3.2.7 - 2024-05-16</h2> <h3>Improvements</h3> <ul> <li> <p>Improve parse performance by using <code>StringScanner</code>.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/106">GH-106</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/107">GH-107</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/108">GH-108</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/109">GH-109</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/112">GH-112</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/113">GH-113</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/114">GH-114</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/115">GH-115</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/116">GH-116</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/117">GH-117</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/118">GH-118</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/119">GH-119</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/121">GH-121</a></p> </li> <li> <p>Patch by NAITOH Jun.</p> </li> </ul> </li> <li> <p>Improved parse performance when an attribute has many <code><</code>s.</p> <ul> <li><a href="https://redirect.github.com/ruby/rexml/issues/124">GH-124</a></li> </ul> </li> </ul> <h3>Fixes</h3> <ul> <li> <p>XPath: Fixed a bug of <code>normalize_space(array)</code>.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/110">GH-110</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/111">GH-111</a></p> </li> <li> <p>Patch by flatisland.</p> </li> </ul> </li> <li> <p>XPath: Fixed a bug that wrong position is used with nested path.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/110">GH-110</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/122">GH-122</a></p> </li> <li> <p>Reported by jcavalieri.</p> </li> <li> <p>Patch by NAITOH Jun.</p> </li> </ul> </li> <li> <p>Fixed a bug that an exception message can't be generated for invalid encoding XML.</p> </li> </ul> <!-- raw HTML omitted --> </blockquote> <p>... (truncated)</p> </details> <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/ruby/rexml/blob/master/NEWS.md">rexml's changelog</a>.</em></p> <blockquote> <h2>3.2.8 - 2024-05-16 {#version-3-2-8}</h2> <h3>Fixes</h3> <ul> <li>Suppressed a warning</li> </ul> <h2>3.2.7 - 2024-05-16 {#version-3-2-7}</h2> <h3>Improvements</h3> <ul> <li> <p>Improve parse performance by using <code>StringScanner</code>.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/106">GH-106</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/107">GH-107</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/108">GH-108</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/109">GH-109</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/112">GH-112</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/113">GH-113</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/114">GH-114</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/115">GH-115</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/116">GH-116</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/117">GH-117</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/118">GH-118</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/119">GH-119</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/121">GH-121</a></p> </li> <li> <p>Patch by NAITOH Jun.</p> </li> </ul> </li> <li> <p>Improved parse performance when an attribute has many <code><</code>s.</p> <ul> <li><a href="https://redirect.github.com/ruby/rexml/issues/124">GH-124</a></li> </ul> </li> </ul> <h3>Fixes</h3> <ul> <li> <p>XPath: Fixed a bug of <code>normalize_space(array)</code>.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/110">GH-110</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/111">GH-111</a></p> </li> <li> <p>Patch by flatisland.</p> </li> </ul> </li> <li> <p>XPath: Fixed a bug that wrong position is used with nested path.</p> <ul> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/110">GH-110</a></p> </li> <li> <p><a href="https://redirect.github.com/ruby/rexml/issues/122">GH-122</a></p> </li> <li> <p>Reported by jcavalieri.</p> </li> <li> <p>Patch by NAITOH Jun.</p> </li> </ul> </li> <li> <p>Fixed a bug that an exception message can't be generated for</p> </li> </ul> <!-- raw HTML omitted --> </blockquote> <p>... (truncated)</p> </details> <details> <summary>Commits</summary> <ul> <li><a href="https://github.com/ruby/rexml/commit/1cf37bab79d61d6183bbda8bf525ed587012b718"><code>1cf37ba</code></a> Add 3.2.8 entry</li> <li><a href="https://github.com/ruby/rexml/commit/b67081caa807fad48d31983137b7ed8711e7f0df"><code>b67081c</code></a> Remove an unused variable (<a href="https://redirect.github.com/ruby/rexml/issues/128">#128</a>)</li> <li><a href="https://github.com/ruby/rexml/commit/94e180e939baff8f7e328a287bb96ebbd99db6eb"><code>94e180e</code></a> Suppress a warning</li> <li><a href="https://github.com/ruby/rexml/commit/d574ba5fe1c40adbafbf16e47533f4eb32b43e60"><code>d574ba5</code></a> ci: install only gems required for running tests (<a href="https://redirect.github.com/ruby/rexml/issues/129">#129</a>)</li> <li><a href="https://github.com/ruby/rexml/commit/4670f8fc187c89d0504d027ea997959287143453"><code>4670f8f</code></a> Add missing Thanks section</li> <li><a href="https://github.com/ruby/rexml/commit/9ba35f9f032c07c39b8c86536ac13a9cb313bef2"><code>9ba35f9</code></a> Bump version</li> <li><a href="https://github.com/ruby/rexml/commit/085def07425561862d8329001168d8bc9c75ae8f"><code>085def0</code></a> Add 3.2.7 entry</li> <li><a href="https://github.com/ruby/rexml/commit/4325835f92f3f142ebd91a3fdba4e1f1ab7f1cfb"><code>4325835</code></a> Read quoted attributes in chunks (<a href="https://redirect.github.com/ruby/rexml/issues/126">#126</a>)</li> <li><a href="https://github.com/ruby/rexml/commit/e77365e2d1c9cdb822c7e09b05fc5a4903d92c23"><code>e77365e</code></a> Exclude older than 2.6 on macos-14</li> <li><a href="https://github.com/ruby/rexml/commit/bf2c8edb5facb206c25a62952aa37218793283e6"><code>bf2c8ed</code></a> Move development dependencies to Gemfile (<a href="https://redirect.github.com/ruby/rexml/issues/124">#124</a>)</li> <li>Additional commits viewable in <a href="https://github.com/ruby/rexml/compare/v3.2.6...v3.2.8">compare view</a></li> </ul> </details> <br /> [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting `@dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- <details> <summary>Dependabot commands and options</summary> <br /> You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show <dependency name> ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) You can disable automated security fix PRs for this repo from the [Security Alerts page](https://github.com/alshedivat/al-folio/network/alerts). </details> Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Added lsi option to _config.yml * Remove lsi command (#2428) Removed lsi command from code since it was added to _config.yml --------- Signed-off-by: George Araujo <[email protected]> * feat: add back-to-top button (#2427) slove #2425 Demo: <img width="1643" alt="image" src="https://github.com/alshedivat/al-folio/assets/119845914/ea73b84b-1d09-4af8-b1ba-6090595f5ab7"> --------- Signed-off-by: simonwei97 <[email protected]> Signed-off-by: Simonwei97 <[email protected]> * Updated tikzjax hash * Added support for search (#2415) Added support for search within the template as suggested in #581. I decided to go with a client side search based on [Ninja keys](https://github.com/ssleptsov/ninja-keys), but using [deepdub's fork](https://github.com/deepdub-ai/ninja-keys) as basis since it supports fuzzy search. Had to do a bunch of changes to their code to make it work without using node to install everything. Also changed to use some colors defined in our side and using both pages' titles and descriptions for search. Also had to increase the template max width to better accomodate the new item in navigation bar. Missing implementations: - [ ] One thing I'd love to do (but currently have no idea how) would be to change the text next to the search button depending on the platform. For example, if the user is accessing the site on a mac they should use ⌘k instead of ctrl k. - [x] Test how this looks like (and how it is supposed to work) on devices with smaller screens - [x] Support for offline mode Some screenshots: --- ## Dark version    --- ## Light version    --------- Signed-off-by: George Araujo <[email protected]> Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Fix: Add back-to-top button (#2433) Fixes #2425 PR #2427 adds a back-to-top button, however the button overlaps with the footer when `footer_fixed: false` and [has inadequate spacing](https://github.com/alshedivat/al-folio/issues/2425#issuecomment-2121670658) with `footer_fixed: true` Changes in this PR: - Fix positioning of button on fixed and sticky footer layouts - Add option to disable back-to-top button by setting `back_to_top: false` in `_config.yml` - Add button transparency to avoid button blocking content view - Reduce size of button Demo - | Device | Fixed footer | Sticky footer | | :-----------: | :-------------: | :-----------: | | Mobile |  |  | | Desktop |  |  | Miscellaneous change - Added personal website under `Academics` to `README.md` * Moved search data inside search.liquid (#2439) Signed-off-by: George Araujo <[email protected]> * Add NEU ESL to README.md (#2441) Embedded System Lab @ Northeastern University (NU-ESL) website recently embraced Jekyll with al-folio theme. Add nuesl link to README.md * feat: search.liquid over all collections (#2447) Thank you @george-gca for the awesome work. on #2415. This PR generalizes the search on all collections. Currently, only projects are added to the search. This PR uses all of them, such as news. On my personal website, I use a teaching collection which is then also automatically searched. * Delete extra space ; Update blog.md (#2444) * Update docker-slim.yml (#2449) Fixed a bug that causes docker-slim action to run and fail on forked repositories. #2103 * Fixed news titles in search (#2450) Signed-off-by: George Araujo <[email protected]> * Add back-to-top to distill layout (#2451) * Delete extra space ; Update post.liquid (#2452) It seems the same problem exists in the posts as well. The relevant PR is [here](https://github.com/alshedivat/al-folio/pull/2444). * Enable specifying explicit list of external posts to display (#2059) - updates `external-posts.rb` plugin, allowing the user to specify an explicit lists of urls in `_config.yml` that are then displayed in the blog feed as external posts - 99% of the code in this change is written by gpt-4: https://chat.openai.com/share/24432d24-36a7-4d6f-a5c0-d7e5142f68cd * Bugfix: Updates ninja keys text input color so it is always visible (#2463) This PR fixes an issue where the search input is not visible in the light theme. This is because `ninja-header-min.js` defaults the text color to white. This style change will ensure that the text is always visible regardless of theme selection ## Before Style Change <img width="1435" alt="SCR-20240530-cnxd" src="https://github.com/alshedivat/al-folio/assets/16251412/dbbc04c6-6e23-4bb5-8278-218d4e0e1329"> ## After Style Change <img width="1434" alt="SCR-20240530-coqb" src="https://github.com/alshedivat/al-folio/assets/16251412/182df8e5-8f54-4eca-a255-b8efbf52db9d"> * Fix: date pill position on CV (#2455) Fixes: #2393 Changes made in this PR - Added `style="width: 75px; transform: translateX(-15px) translateY(-5px);">` to move the date pill `15px` to the left and `5px` to the top | Before | After | | :-----: | :----: | |  |  | * Bugfix: Collapse the navbar on mobile when the user selects search (#2462) This PR addresses #2438 by programmatically collapsing the navbar if the user clicks on search on mobile. ## Behavior before  ## Behavior after  * Update search.liquid (#2466) missing { in osf section * Feature: Dynamically sets the search shortcut key based on the user's platform (#2461) This addresses issue #2437 by: - Adding a new script that dynamically sets the search keyboard shortcut by checking what platform the user is currently using - Loading this script in `default.liquid` <img width="1150" alt="SCR-20240529-cdfe" src="https://github.com/alshedivat/al-folio/assets/16251412/7c4125fc-5028-422f-97d5-0df729e30fa7"> * Fixes external blog posts in search (#2470) Fixes #2469. Separated `news` and `posts` from other collections in search, since it caused duplicated entries. Also to ensure they are in chronological reverse order. Signed-off-by: George Araujo <[email protected]> * Update README.md (#2479) Added big-culture.github.io to the list of labs, and jackjburnett.github.io to the list of academics * [Tweak] Update "search filters" displayed on the blog's front page (#2480) # [Tweak] Update "search filters" on blog's front page ## Current Behavior ``` 1. Go to `blog/` 2. Select "🏷️ Blockquotes" "search filter" => `blog/category/blockquotes/` returns 404 ``` <img width="400" alt="current-01-blog-filters" src="https://github.com/alshedivat/al-folio/assets/5504473/dae7f061-864d-49f3-9af1-1ef30c8056cd"> <img width="400" alt="current-02-category-blockquotes" src="https://github.com/alshedivat/al-folio/assets/5504473/c09422a9-a2c7-4f81-8534-1f310c4f9876"> <hr> ## Resolution in PR 1. Append 'blockquotes' to [`display_tags`](https://github.com/alshedivat/al-folio/pull/2480/files#diff-ecec67b0e1d7e17a83587c6d27b6baaaa133f42482b07bd3685c77f34b62d883R295) 2. Replace 'blockquotes' with 'external-services' in `display_categories` => Display 'blockquotes' tag and 'external-services' category on blog's front page <img width="400" alt="v2-01" src="https://github.com/alshedivat/al-folio/assets/5504473/c2f62a12-578d-44e0-ae8c-d6998fe8e2cb"> <br> <img width="300" alt="v2-02" src="https://github.com/alshedivat/al-folio/assets/5504473/8df86ea0-46d6-4389-904d-24965d74ace9"> <img width="300" alt="v2-03" src="https://github.com/alshedivat/al-folio/assets/5504473/6407812a-2052-4e0c-88bf-0d70d1c03ed8"> * [Tweak] Add bottom padding to project card (#2492) ## Current Behavior ### Vertical 👎 There is _no_ space between cards in the vertical project layout <img width="400" alt="v1-vertical" src="https://github.com/rstein66/al-folio/assets/5504473/c97b558d-dc10-4b1f-9547-51e1710c82d3"> <br> ### Horizontal 👍 Card spacing already looks good in horizontal layout <img width="350" alt="v1-horizontal" src="https://github.com/rstein66/al-folio/assets/5504473/1548766b-41ab-447a-ba35-fdb45ff92545"> ## Proposed Resolution **Simplistic** resolution: add padding to card's bottom (in both vertical and horizontal project layout) <img width="400" alt="v2-vertical" src="https://github.com/rstein66/al-folio/assets/5504473/739eef5d-077f-46b7-a99a-52c6a82c5515"> <img width="350" alt="v2-horizontal" src="https://github.com/rstein66/al-folio/assets/5504473/ba1e8269-193b-4151-b7af-915ace97d240"> * Update README.md (#2493) Added Physics-Morris.github.io to the list of academics. Co-authored-by: Morris Huang <[email protected]> * Fixed issue with vega * Fix code blocks not changing to plots and others (#2497) For some unknown reason, all the `document.onreadystatechange = () => {` checks stopped working. Thankfully, replacing them with `document.addEventListener("readystatechange", () => {` fixed the issues. --------- Signed-off-by: George Araujo <[email protected]> * fix: remove 'index.html' in pagination (#2509) Currently, on the [blog](https://alshedivat.github.io/al-folio/blog/) page, clicking "older" and "newer" on the pagination at the bottom direct you forward to links like `/al-folio/blog/page/2/` and backward to `/al-folio/blog/`. However, if you click on the `1`, `2`.. etc buttons, there is a different behavior. The links now contain an `index.html`. For example, clicking `2` leads you to `/al-folio/blog/page/2/index.html`. It is the same content, just with a messier hyper link. Same with clicking `1`, you are brought to `/al-folio/blog/`. This fix creates a consistency among the hyper links in pagination. * Added SRaf.ir to README.md (#2510) Hi, I would be more than happy if I could add my personal website here. * Support pirsch.io for analytics (#2513) * Fixed external post symbol on search (#2515) Fixes #2471 Signed-off-by: George Araujo <[email protected]> * fix: blog highlighted in nav for child pages (#2516) Currently, in all blog posts, or any child page under /blog, the "blog" in nav is not highlighted. In all other child pages for a parent in nav, the parent is highlighted. For example, in a sub page of projects, projects in nav is highlighted. This fix creates a consistent behavior for nav and highlights the blog in nav if in a blog post. BEFORE: <img width="1427" alt="image" src="https://github.com/alshedivat/al-folio/assets/52665298/fc79727c-dc22-4af7-8c16-80efa216ecbc"> AFTER: <img width="1434" alt="image" src="https://github.com/alshedivat/al-folio/assets/52665298/6b32e7f9-e421-4b08-b86e-813b20ac058e"> * Support superscripts in bibtex author names (#2512) Implements #2511 * Added support for a newsletter (#2517) In reference to idea: https://github.com/alshedivat/al-folio/discussions/2097 In reference to request: https://github.com/alshedivat/al-folio/issues/923#issuecomment-2171924663 Added support to integrate a [loops.so](https://loops.so/) mailing list into the site. To use, you need to enable `newsletter` in `_config.yml`. You also must specify a loops endpoint (although I think any mailing list endpoint can work), which you can get when you set up a mailing list on loops. More documentation on loops: [here](https://loops.so/docs/forms/custom-form). Once that is enabled, the behavior is different depending on how you specified your footer to behave in `_config.yml`. If `footer_fixed: true`, then the sign up will appear at the bottom of the about page, as well as at the bottom of blog posts, if you enable `related_posts`. If `footer_fixed: false`, then the newsletter signup will be in the footer (on every page), like it is in on [my website](https://asboyer.com). I'm not attached to the placement of the signup, and you can choose to include it wherever you want with `{% include scripts/newsletter.liquid %}`. Also if you include positional variables into that, you can choose how you center the signup. So `{% include scripts/newsletter.liquid left=true %}` positions the signup bar to the left. Here are some screenshots below: ## Dark version  ## Light version  I think the input field color should probably change to maybe be light for both themes? What do you think? I think the dark background looks cool, but I don't usually see that done like that on other sites. ## Footer fixed   ## Footer not fixed   To clarify, if footer isn't fixed, the email signup will appear on every page. --------- Co-authored-by: George <[email protected]> * Fixed docker-slim.yml issue * Add example use of annotation and superscripts in bibtex (#2520)     * Bib changes now trigger build action * Changes to docker-slim.yml now trigger action * Changes to deploy-image.yml now trigger action * Changes to deploy-docker-tag.yml now trigger action * Update CUSTOMIZE.md for Newsletter support (#2521) In reference to https://github.com/alshedivat/al-folio/pull/2517 and https://github.com/alshedivat/al-folio/pull/2517#issuecomment-2179244937 * Fix Altmetric badge not correctly set when Altmetric id is provided (#2522) To reproduce the bug: ```bibtex @inproceedings{Vaswani2017AttentionIA, title = {Attention is All you Need}, author = {Ashish Vaswani and Noam M. Shazeer and Niki Parmar and Jakob Uszkoreit and Llion Jones and Aidan N. Gomez and Lukasz Kaiser and Illia Polosukhin}, booktitle = {Neural Information Processing Systems}, year = {2017}, doi = {10.48550/arXiv.1706.03762}, altmetric = {21021191} } ``` The bug is 1. It seems to be some weird property of the liquid template that [line 252-254](https://github.com/alshedivat/al-folio/blob/8d82670ff170f98e7d7ea5434428234a8216d460/_layouts/bib.liquid#L252-L254) doesn't work at all. According to [this post](https://stackoverflow.com/questions/59887447/liquid-how-to-assign-the-output-of-an-operator-to-a-variable) and [this issue](https://github.com/Shopify/liquid/issues/236), liquid doesn't support assign the output of operator to a variable nor a ternary operator. So based on my console log, the value of `entry_has_altmetric_badge` is always a string value of `entry.altmetric` when altmetric is provided in bibtex. ```liquid {% assign entry_has_altmetric_badge = entry.altmetric or entry.doi or entry.eprint or entry.pmid or entry.isbn %} {% assign entry_has_dimensions_badge = entry.dimensions or entry.doi or entry.pmid %} {% assign entry_has_google_scholar_badge = entry.google_scholar_id %} {% if entry_has_altmetric_badge or entry_has_dimensions_badge or entry_has_google_scholar_badge %} <div class="badges"> {% if site.enable_publication_badges.altmetric and entry_has_altmetric_badge %} <span ... ``` Note that this could be problematic that a string in liquid is always evaluated as true as long as it is defined regardless if it is "" or "false". [reference](https://shopify.github.io/liquid/basics/truthy-and-falsy/) 2. when altmetric is defined in bibtex, now the order of set attribute to badge is eprint > doi > altmetric id > pmid > ISBN, and the badge doesn't work when an arxiv doi is provided. I think the expected behavior should be 1. as documented in CUSTOMIZE.md, only render the badge when the entry is set to either "true" or the altmetric id. (It could also implement to always render the badge whenever doi or other related attribute is set, and set altmetric to "false" to disable it) ```md - `altmetric`: Adds an [Altmetric](https://www.altmetric.com/) badge (Note: if DOI is provided just use `true`, otherwise only add the altmetric identifier here - the link is generated automatically) ``` 2. if the almetric id is set, use it first. * Fix repo card heigth for different repo descriptions (#2525) Hello! I had this minor issue on my website and I saw few other people using this template and having the same issue. **Brief** if two repo's in the same row has different number of lines for the descriptions, heights of the cards will not be the same if we don't force the number of lines to be displayed. **Solution** By looking at [This issue](https://github.com/anuraghazra/github-readme-stats/issues/2900) I could see that they solved it by adding an new option, `description_lines_count`. This was used on the API request in order to fix the issue. --- ## Issue reproduced:  --- ## Issue fixed after the commit:  * Update README.md * Add linux x86-64 to Gemfile.lock (#2549) Fixes #2544 Generated via: ``` bundle lock --add-platform x86_64-linux ``` * feat: simple filtering / searching on bibliography (#2523) This PR adds a simple filter/search functionality to the bibliography. It can be used in two ways: 1. Simply enter a search term in the input box. 2. Send a search term via the `location.hash`, e.g., https://alshedivat.github.io/al-folio/publications/#mechanics **Notes:** - The search box is optional. It can be simply removed if anyone does not like it. - Searching via `hash` works without the search box. My idea is to use this functionality to index all BibTeX entries via the `ctrl-k` search and link them via their BibTeX key. - Searching via `hash` could also be used to set static links on the current page, e.g., to filter specific co-authors, venues, etc. - I don't know much about the design of the input field. I simply reused the newsletter box style. - Entering a search term in the box does exact matching. No fuzzy search, no AND/OR logic. I kept it very simple. Maybe anyone else wants to improve it in the future. - The search looks in all data in the BibTeX entry that is parsed via `bib.liquid`. E.g., it is possible to search for BibTeX keys, titles, authors, years, venues, abstracts, or whatever `bib.liquid` prints. - I used a 300ms delay before starting to search on the input box. - Entering search terms in the box does not update the location hash (things could get complex otherwise due to automatically updating each other...) - If the filter does not find any match in a specific year, the year is also made invisible. **Screenshot** <img width="935" alt="screenshot" src="https://github.com/alshedivat/al-folio/assets/1998723/447003e2-c623-4de9-b2c5-2357117a7743"> Looking for feedback. * Fix space before some bib commas (#2552) These somehow appeared when upgrading from v0.11.0 to v0.12.0. * Avoid broken links check for video blog post * Fix search in Distill style post (#2555) Fixes issue #2554: search function is out of order in a distill style post. * Aggregated search code inside search.liquid (#2558) Signed-off-by: George Araujo <[email protected]> * Fixed title search and truncating if larger than 13 words (#2561) Fixes #2459 Signed-off-by: George Araujo <[email protected]> * Fixed mathjax hash Changed to "not" minified version of mathjax since it is already minified * Fixed spacing between {{}} in bib.liquid * Fixed search for multiline news * Make publication badges always visible (#2565) ## The issue Currently Altmetric and Dimension publication badge elements have non-obvious attributes that hide badges when some conditions are not met ,e.g.: ``` data-hide-no-mentions="true" data-hide-less-than="15" ``` resulting in seemingly strange behavior where badges are enabled in `config.yml` but don't show up consistently, as reported in #2443 : Altmetric badges don't display for some pubs. ## This PR - removes these hidden nondisplay conditions in favor of more predictable website behavior; - adds documentation links to point users interested in customizing badge behavior to the right resources. * fix: search_enabled -> bib_search (#2560) In #2523, I did a copy&paste error with https://github.com/alshedivat/al-folio/commit/07d6e619cced7a2256bbe6de582ad68f93cd1553 I used the global `search_enabled` config key instead of the correct `bib_search` key. This PR fixed it. * Update collections permalinks in _config.yml * Fixed error in bibsearch.js * Remove 'version's as it's obsolete; Update docker-compose files (#2574) * Updated to font awesome 6.6.0 (#2581) Updated to [FontAwesome 6.6.0](https://github.com/FortAwesome/Font-Awesome/releases/tag/6.6.0) --------- Signed-off-by: George Araujo <[email protected]> * Updated dependencies (#2582) Signed-off-by: George Araujo <[email protected]> * Fix typo in entry associated to award button (#2583) * Improved FAQ readability * Added example of site with css and js not loaded * Expliciting how to handle wrong theme for site in FAQ.md * Fixed prettier complaints on FAQ * Add user link to user community (#2592) * Remove github-metadata post (#2599) The jekyll-github-metadata plugin was removed in PR #668, so this no longer works. Clearly broken here: https://alshedivat.github.io/al-folio/blog/2020/github-metadata/. * Lighthouse Badger token as secret (#2589) In the [FAQ](https://github.com/alshedivat/al-folio/blob/master/FAQ.md#my-webpage-works-locally-but-after-deploying-it-is-not-displayed-correctly-css-and-js-are-not-loaded-properly-how-do-i-fix-that), it is mentioned to "add it as a secret". However, the Lighthouse Badger documentation specifies using an environment variable. I've updated this to use secrets instead, as it is more secure and appropriate for using a Personal Access Token (PAT). #### Personal Access Token (fine-grained) Permissions: - **contents**: access: read and write - **metadata**: access: read-only #### Personal Access Token (classic) Permissions: - **repo** [refer](https://github.com/MyActionWay/lighthouse-badger-workflows#lighthouse-badger-easyyml:~:text=and%20permissions%20required-,PAT%20(fine%2Dgrained)%3A%20repository%20permissions,-contents%20%3D%3E%20access%3A%20read) For more information, refer to the [GitHub documentation on using secrets in GitHub Actions](https://docs.github.com/en/actions/security-guides/using-secrets-in-github-actions). * Added customizing css to CUSTOMIZE.md (#2602) Signed-off-by: George Araújo <[email protected]> * Updated dependencies (#2613) Fix https://github.com/alshedivat/al-folio/security/dependabot/4 Signed-off-by: George Araújo <[email protected]> * [bug-fix] Add padding to default markdown table cells (#2617) Default, meaning `pretty_table: false` ## Sample code ```md | First Column | Second Column | Third Column | |------------------|-----------------|----------------| | Sed in. | Sed non. | Morbi egestas. | | Donec facilisis. | Suspendisse eu. | Nulla porta. | | Praesent a. | Interdum et. | Sed nec. | ``` ### Current result <img width="369" alt="current-default" src="https://github.com/user-attachments/assets/7dc74cfd-ed60-46eb-a1c1-bf3df74bac59"> ### Proposed result <img width="378" alt="updated-default" src="https://github.com/user-attachments/assets/2bf83fb5-f7b1-4d4b-88aa-e55d3420aeaf"> * Alon Kellner portfolio link (#2627) I used al-folio's fork [multi-language-al-folio](https://github.com/george-gca/multi-language-al-folio) to create my portfolio, I love it :) * Update Prettier information on FAQ.md * [Bug-fix] Make custom blockquote font coloring consistent (#2622) Currently, the tip, warning, and danger custom blockquote's font color is not customized when the text is styled as bold, italics, or a list item. As a result, the text is slightly less attractive in light mode and almost illegible in dark mode. ## Screenshot: Current <img width="400" alt="current-darkmode" src="https://github.com/user-attachments/assets/1cdd5861-76a2-45bd-a948-99cf35f9c87e"> ## Screenshot: Proposed <img width="400" alt="proposed-darkmode" src="https://github.com/user-attachments/assets/03fbd4d3-e3f5-498a-bef6-153e1ad55289"> * Fixed prettier complaints on FAQ.md * added personal website for Beryl Sui (#2628) Thank you for this amazing template :) * [Feature] InspireHEP social and citation count badge (#2638) [INSPIRE](http://inspirehep.net/) is a trusted community hub that facilitates the sharing and discovery of accurate scholarly information in high energy physics. By integrating the social and citation count badge, al-folio users within this community will gain significant benefits. In continuation of #2634, I am creating this pull request. ## Details ### Social Icon - Add your INSPIRE author ID in the `config.yml` under `inspirehep_id`. ### Citation Count - Enable this feature by setting `inspirehep` to `true` under `enable_publication_badges` in your `config.yml` file. - In your bibliography file (e.g., `papers.bib`), add `inspirehep_id = {the literature's recid}` under the citation of a literature source. * Update README.md (#2644) add Ming's website page Co-authored-by: George <[email protected]> * Adding own github-page to README.md (#2645) Co-authored-by: George <[email protected]> * Update _config.yml to add a filtered bibtex keyword (#2648) Added the google_scholar_id to filtered keywords * Fix no github_users titling in repositories.md (#2647) Inverted order of title and {% if site.data.repositories.github_users %}, so that if there is no github_users, the "GitHub users" title does not appear. * Update INSTALL.md recommended approach * Update INSTALL.md * Update INSTALL.md with running time of actions * Added video tutorial to install instructions (#2653) Signed-off-by: George Araújo <[email protected]> * Update INSTALL.md link to video tutorial * Bump rexml from 3.3.4 to 3.3.6 (#2654) Bumps [rexml](https://github.com/ruby/rexml) from 3.3.4 to 3.3.6. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/ruby/rexml/releases">rexml's releases</a>.</em></p> <blockquote> <h2>REXML 3.3.6 - 2024-08-22</h2> <h3>Improvements</h3> <ul> <li> <p>Removed duplicated entity expansions for performance.</p> <ul> <li><a href="https://redirect.github.com/ruby/rexml/issues/194"…
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