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Amber v3.6

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@hongwingl hongwingl released this 09 Feb 22:33
· 7718 commits to master since this release

Changes

Add functionality to detect regions of homozygosity in the germline sample
Config:

Remove tumor_only flag. Tumor only mode is now activated when no reference bam file is provided.
Output:

A new REFERENCE.amber.homozygousregions.tsv
amber QC file added ConsanguinityProportion and UniparentalDisomy.