update FSL version

harvard-nrg · Jan 29, 2025 · 7c0d49d · 7c0d49d
1 parent 9e1d4d8
commit 7c0d49d
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Showing 4 changed files with 12 additions and 12 deletions.
diff --git a/dwiqc/tasks/prequal.py b/dwiqc/tasks/prequal.py
@@ -166,13 +166,13 @@ def get_fsl_sif(self):
 
 		if self._container_dir:
 			try:
-				self._fsl_sif = f'{self._container_dir}/fsl_6.0.4.sif'
+				self._fsl_sif = f'{self._container_dir}/fsl_6.0.7.15.sif'
 			except FileNotFoundError:
-				logger.error(f'{self._container_dir}/fsl_6.0.4.sif does not exist. Verify the path and file name.')
+				logger.error(f'{self._container_dir}/fsl_6.0.7.15.sif does not exist. Verify the path and file name.')
 				sys.exit(1)
 		else:
 			home_dir = os.path.expanduser("~")
-			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.4.sif')
+			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.7.15.sif')
 
 
 	def create_spec(self, inputs_dir):

diff --git a/dwiqc/tasks/prequal_EQ.py b/dwiqc/tasks/prequal_EQ.py
@@ -29,16 +29,16 @@ def build(self):
 
 		if self._container_dir:
 			try:
-				self._fsl_sif = f'{self._container_dir}/fsl_6.0.4.sif'
+				self._fsl_sif = f'{self._container_dir}/fsl_6.0.7.15.sif'
 			except FileNotFoundError:
-				logger.error(f'{self._container_dir}/fsl_6.0.4.sif does not exist. Verify the path and file name.')
+				logger.error(f'{self._container_dir}/fsl_6.0.7.15.sif does not exist. Verify the path and file name.')
 				sys.exit(1)
 
 		else:
 
 			home_dir = os.path.expanduser("~")
 
-			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.4.sif')
+			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.7.15.sif')
 
 		os.chdir(f"{self._outdir}/EDDY")
 

diff --git a/dwiqc/tasks/qsiprep.py b/dwiqc/tasks/qsiprep.py
@@ -51,15 +51,15 @@ def check_container_path(self):
 				logger.error(f'{self._container_dir}/qsiprep.sif does not exist. Verify the path and file name.')
 				sys.exit(1)
 			try:
-				self._fsl_sif = f'{self._container_dir}/fsl_6.0.4.sif'
+				self._fsl_sif = f'{self._container_dir}/fsl_6.0.7.15.sif'
 			except FileNotFoundError:
-				logger.error(f'{self._container_dir}/fsl_6.0.4.sif does not exist. Verify the path and file name.')
+				logger.error(f'{self._container_dir}/fsl_6.0.7.15.sif does not exist. Verify the path and file name.')
 				sys.exit(1)
 
 		else:
 			home_dir = os.path.expanduser("~")
 			self._qsiprep_sif = os.path.join(home_dir, '.config/dwiqc/containers/qsiprep.sif')
-			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.4.sif')
+			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.7.15.sif')
 
 
 	def calc_mporder(self):

diff --git a/dwiqc/tasks/qsiprep_EQ.py b/dwiqc/tasks/qsiprep_EQ.py
@@ -33,16 +33,16 @@ def build(self):
 
 		if self._container_dir:
 			try:
-				self._fsl_sif = f'{self._container_dir}/fsl_6.0.4.sif'
+				self._fsl_sif = f'{self._container_dir}/fsl_6.0.7.15.sif'
 			except FileNotFoundError:
-				logging.error(f'{self._container_dir}/fsl_6.0.4.sif does not exist. Verify the path and file name.')
+				logging.error(f'{self._container_dir}/fsl_6.0.7.15.sif does not exist. Verify the path and file name.')
 				sys.exit(1)
 
 		else:
 
 			home_dir = os.path.expanduser("~")
 
-			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.4.sif')
+			self._fsl_sif = os.path.join(home_dir, '.config/dwiqc/containers/fsl_6.0.7.15.sif')
 
 
 		# Define working directory for the subject