Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add script to download dbGaP study identifiers from BDC Gen3 #323

Merged
merged 5 commits into from
Sep 29, 2023

Conversation

gaurav
Copy link
Collaborator

@gaurav gaurav commented Sep 28, 2023

This PR adds a script to download dbGaP study identifiers from BDC Gen3. This means that we don't need to update that file manually any more, but can run this script to update it automatically instead!

It also updates the dbGaP identifiers file with the current identifiers from BDC Gen3. Note that this script ignores non-dbGaP study IDs, since Dug doesn't support those as yet.

Once the dbGaP IDs file is moved into another repository, this script should move with it.

@gaurav gaurav force-pushed the add-bdc-gen3-study-download branch from 62fbaa6 to 31f4fec Compare September 28, 2023 22:40
@gaurav gaurav marked this pull request as ready for review September 28, 2023 22:40
@YaphetKG YaphetKG merged commit 1383d80 into develop Sep 29, 2023
@YaphetKG YaphetKG deleted the add-bdc-gen3-study-download branch September 29, 2023 18:07
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants