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@EugeneRumynskiy EugeneRumynskiy released this 01 Sep 17:49
0.4.1
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immunarch 0.4.1

Features

  • feat(diversity): aded a column choice for repDiversity

Minor updates

  • Continuous integration process improved. We are heading towards improvements in code and commit organization in the repository.
  • Some parts were refactored: explore, inst, io, kmers, overlap, package, public-repertoire, shiny, spectratype, tests.
  • Improved tests for: clonality, diversity, dynamics, explore, gene-usage, kmers, overlap, public-repertoire.
  • Docs: general improvements, fixed typos.

Bug fixes

  • fix(clonality): fix docs in repDiversity, prepare to CRAN check
  • fix(diversity): fix docs in repDiversity, prepare to CRAN check
  • fix(diversity): fix R check from repDiversity
  • fix(gene-usage): add a comment for a future fix, make it work with data.tables properly
  • fix(io): fix a bug when .compress=F doesn't work in repSave if .format = "immunarch"
  • fix(package): fix CRAN NOTE about dtplyr
  • fix(package): change version to 0.4.0.9000 and fix the description for the CRAN release
  • fix(public-repertoire): fix .coding doesn't work
  • fix(tests): fix clonality tests
  • fix(tests): fix spectratyping tests
  • fix(tests): fix overlap tests
  • fix(tests): remove unnecessary print() from spectratype testing
  • fix(vignette): fix spectratype in the vignette
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