v2.2
interactivereport
released this
16 Oct 20:11
·
378 commits
to master
since this release
- FIx a bug if rules of description line is not followed exactly
Add short description and initial graph settings. “|” and “by” are delimiters for VIP to parse the initial settings. Please follow the same rule for your own h5ad files. Please ensure to use matching names (umap, cell_type) in your data set.
adata.obs['>Description'] = ['Human brain snRNAseq 46k cells (MS Nature 2019 Schirmer et al.); data - normalized, log transformed and scaled UMI; platform - 10X v2 chemistry | embedding by umap; color by cell_type']*adata.n_obs