Nussinov RNA Visualizer

Nussinov RNA Visualizer is a web application that shows the Nussinov plot and force-directed graph of the secondary structure of RNA strands. It also shows the dot-parentheses format of the Nussinov algorithm output.

The application is hosted on GitHub Pages, where you can access it in your browser.

View Nussinov RNA Visualizer online

Usage

• Type a DNA or RNA string in the input field. FASTA format is also accepted.
• Change the minimum hairpin length, the minimum number of bases between a base pair.
• Drag nodes on the force-directed graph to rearrange them.

Development

Install packages

npm install

Run the app in development mode

npm start

Runs the app in the development mode.
Open http://localhost:3000 to view it in the browser.

The page will reload if you make edits. You will also see any lint errors in the console.

Run the linter

npm run lint -- --fix

Runs the linter and fixes errors automatically where possible. The linter enforces the Airbnb JavaScript Style Guide (with TypeScript bindings).