Add: support for ndarray and DataFrame anndata

jiajic · Aug 4, 2024 · f49c752 · f49c752
1 parent e622a46
commit f49c752
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/R/interoperability.R b/R/interoperability.R
@@ -237,6 +237,7 @@ anndataToGiotto <- function(
     X <- extract_expression(adata)
     cID <- extract_cell_IDs(adata)
     fID <- extract_feat_IDs(adata)
+    X <- methods::as(as.matrix(X), "sparseMatrix")
     X@Dimnames[[1]] <- fID
     X@Dimnames[[2]] <- cID
     # Expression matrix X ready