Gene variant chemical drug graph.

Deploy Neo4j graph in server

1. Create neo4j folder if it's not existed

mkdir -p /home/zhangke/docker_volume/neo4j/upload

2. Move dump file into upload folder

cp <source_dump_file> /home/zhangke/docker_volume/neo4j/upload/neo4j.db.dump

3. Load data into neo4j, then persist data into localhost neo4j/data folder

docker run -it \
    -v=/home/zhangke/docker_volume/neo4j/data:/data \
    -v=/home/zhangke/docker_volume/neo4j/upload:/upload \
    neo4j:4.3.1 \
neo4j-admin load --from=/upload/neo4j.db.dump --database=neo4j --force

4. Delete existed neo4j container, use docker compose to create a new neo4j service.

docker-compose -f <neo4j_compose_file> up -d

5. Upgrade neo4j volume

1. Stop running neo4j container.
2. Delete data folder and upload new dump file to upload folder.
3. Initialize a new neo4j instance to load new dump file.
4. Run compose file to start neo4j service.

dump file

neo4j-admin dump --database=neo4j --to=d:/<file_path>

load file

neo4j-admin load --from=/upload/neo4j.db.dump --database=neo4j --force