add a task for running the service while cooking the java.library.pat…

…h, remove useless stuff for macOs, remove the jep library in grobid-home

build.gradle

@@ -389,8 +389,26 @@ project(":grobid-service") {
             }
         }
     }
+
+    task("run-server", dependsOn: 'classes', type: JavaExec, group: 'application') {
+        main = 'org.grobid.service.main.GrobidServiceApplication'
+        classpath = sourceSets.main.runtimeClasspath
+        workingDir = ".."
+        args 'server', 'grobid-home/config/grobid.yaml'
+        jvmArgs '-Xmx3072m'
+//        conda_env_path = "$System.env.CONDA_PREFIX"
+        systemProperty "java.library.path","${System.getProperty('java.library.path')}:" +
+            "${file("../grobid-home/lib/lin-64/jep").absolutePath}:" +
+            "${file("../grobid-home/lib/lin-64").absolutePath}:" +
+            "${file("../grobid-home/lib/mac-64").absolutePath}:" +
+            "${System.env.CONDA_PREFIX}/lib:" +
+            "${System.env.CONDA_PREFIX}/lib/python3.8/site-packages/jep"
+    }
 }
 
+// /Users/lfoppiano/opt/anaconda3/envs/jep/lib/python3.8/site-packages/jep
+// /Users/lfoppiano/opt/anaconda3/envs/jep/lib
+
 project(":grobid-trainer") {
     apply plugin: 'com.github.johnrengelman.shadow'
     apply plugin: 'jacoco'

grobid-core/src/main/java/org/grobid/core/main/LibraryLoader.java

@@ -149,6 +149,7 @@ public boolean accept(File dir, String name) {
                 // loading here will not help)
                 try {
                     //addLibraryPath(libraryFolder.getAbsolutePath() + File.separator + DELFT_NATIVE_LIB_NAME);
+//                    System.out.println(System.getProperty("java.library.path"));
 
                     PythonEnvironmentConfig pythonEnvironmentConfig = PythonEnvironmentConfig.getInstance();
                     if (pythonEnvironmentConfig.isEmpty()) {
@@ -166,7 +167,7 @@ public boolean accept(File dir, String name) {
 
                         if (SystemUtils.IS_OS_MAC) {
 //                            System.setProperty("java.library.path", System.getProperty("java.library.path") + ":" + libraryFolder.getAbsolutePath());
-                            System.loadLibrary("python" + pythonEnvironmentConfig.getPythonVersion() + "m");
+                            System.loadLibrary("python" + pythonEnvironmentConfig.getPythonVersion());
                             System.loadLibrary(DELFT_NATIVE_LIB_NAME);
                         } else if (SystemUtils.IS_OS_LINUX) {
                             System.loadLibrary(DELFT_NATIVE_LIB_NAME);