Nextflow skeleton for TWAS using GAMBIT (PTWAS) #3
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eBsowka
reviewed
Jan 6, 2022
eBsowka
approved these changes
Jan 10, 2022
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Looking good 👍
Rerun analysis: https://cloudos.lifebit.ai/app/jobs/61dc0b468c574a01e8d6345e
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Overview
This PR:
Changes
Dockerfilefor building container needed to run GAMBITREADME.mdwith outline of steps and necessary input filesptwas_scanprocess which performs testing using input GWAS summary statistics and GTEx eQTL weightsTest
Lifebit CloudOS, Lifebit Internal Production workspace
https://cloudos.lifebit.ai/app/jobs/61d485338c574a01e8d4e0a8