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Merge branch 'master' of https://github.com/marbl/Mash
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Brian Ondov committed Oct 27, 2015
2 parents f409f46 + 90b8cd6 commit 61dfc47
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15 changes: 12 additions & 3 deletions doc/sphinx/data.rst
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Supporting Data
===============

Pre-sketched RefSeq database (107MB, k=16, s=400):
Supplementary Files from the Paper
----------------------------------

.. download::
`SupplementaryData1.msh.gz <http://gembox.cbcb.umd.edu/mash/SupplementaryData1.msh.gz>`_: Mash sketch database (k=16, s=400) for RefSeq release 70 (48MB)

`refseq.msh <https://github.com/marbl/Mash/raw/master/data/refseq.msh>`_
`SupplementaryData2.tar.gz <http://gembox.cbcb.umd.edu/mash/SupplementaryData2.tar.gz>`_: Mash version 1.0 codebase (93KB)

`SupplementaryTable1.xlsx <http://gembox.cbcb.umd.edu/mash/SupplementaryTable1.xlsx>`_: Names and accessions for 500 selected Escherichia genomes, pairwise ANI, and pairwise Jaccard indexes for various k-mer and sketch sizes (93MB)

`SupplementaryTable2.xlsx <http://gembox.cbcb.umd.edu/mash/SupplementaryTable2.xlsx>`_: Names and accessions for the 17 primate genomes (41KB)

`SRR2671867.BaAmes.poretools.fastq.gz <http://gembox.cbcb.umd.edu/mash/SRR2671867.BaAmes.poretools.fastq.gz>`_: Nanopore 1D + 2D sequences generated by poretools (157MB)

`SRR2671868.Bc10987.poretools.fastq.gz <http://gembox.cbcb.umd.edu/mash/SRR2671868.Bc10987.poretools.fastq.gz>`_: Nanopore 1D + 2D sequences generated by poretools (250MB)
5 changes: 3 additions & 2 deletions doc/sphinx/index.rst
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Fast genome distance estimation with the MinHash algorithm
Fast genome and metagenome distance estimation using MinHash

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Publication
Preprint
===========
Coming soon...

.. toctree::

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