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Fix metap ingest #1499

Merged
merged 2 commits into from
Dec 23, 2024
Merged

Fix metap ingest #1499

merged 2 commits into from
Dec 23, 2024

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naglepuff
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@naglepuff naglepuff commented Dec 19, 2024

Fix #1496
Closes #1468

Special logic for gene function search wasn't being applied in all cases. Additionally, there were issues with ingesting MetaP gene function annotations that are resolved here, including a slight change to the data model on the mongo side. Further work should be done to remove the best_protein column from our database.

Since the initial change is intended to be a hotfix, I am leaving out any data model changes to keep scope and complexity at a minimum. That progress will be tracked in #1484

Base automatically changed from fix-empty-relevant-protocols to main December 19, 2024 20:02
@naglepuff naglepuff marked this pull request as ready for review December 19, 2024 20:02
@naglepuff naglepuff requested a review from marySalvi December 19, 2024 20:02
@naglepuff naglepuff merged commit 9c6f640 into main Dec 23, 2024
13 of 17 checks passed
@naglepuff naglepuff deleted the hotfix-1496-fix-gene-search branch December 23, 2024 20:07
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