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Updated commands to match modifications in setup.py
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Dana Elizabeth Wyman committed Sep 17, 2019
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Expand Up @@ -98,9 +98,9 @@ The columns in the resulting output file are:
If you would like to extract an abundance matrix for your TALON-processed datasets, use the tool *talon_create_abundance_file_from_database*.

```
talon_create_abundance_file_from_database --h
talon_abundance --h
Usage: talon_create_abundance_file_from_database [options]
Usage: talon_abundance [options]
Options:
-h, --help show this help message and exit
Expand Down Expand Up @@ -146,7 +146,7 @@ One column per dataset, with a count indicating how many times the current trans
### Obtaining a custom GTF transcriptome annotation from a TALON database

```
talon_create_GTF_from_database --h
talon_create_GTF --h
Options:
-h, --help show this help message and exit
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