Development

libs/features/ramp/pathway-enrichment/src/lib/pathway-enrichment/pathway-enrichment.component.ts

@@ -517,14 +517,18 @@ export class PathwayEnrichmentComponent
 
   fetchEnrichedPathwaysFile(): void {
     let data: unknown[];
+    let analyteType = 'both';
     if (this.enrichedDataframe.fishresults) {
      data = this.enrichedDataframe.fishresults as unknown[]
     } else {
       data = this.enrichedDataframe as unknown[]
     }
+    if(this.enrichedDataframe.analyte_type) {
+      analyteType = this.enrichedDataframe.analyte_type[0];
+    }
     const fff = new FisherResult(data[0] as Partial<FisherResult>)
       this._downloadFile(
-      this._toTSV(data, fff._getFields()),
+      this._toTSV(data, fff._getFields(analyteType)),
       'fetchEnrichedPathwaysFromAnalytes-download.tsv',
     );
   }

libs/models/ramp-models/src/lib/fisher-result.ts

@@ -47,7 +47,12 @@ export class FisherResult {
     }
   }
 
-  _getFields() {
-   return Object.keys(this).filter(field => !['Total_In_Path', 'Pval_Holm', 'Pval_FDR', 'Pval', 'Num_In_Path', 'metabCount',	'geneCount',	'pathCount'].includes(field));
+  _getFields(analyte_type: string) {
+    let ret: string[];
+    if(analyte_type ==='both') {
+      return Object.keys(this).filter(field => !['Total_In_Path', 'Pval_Holm', 'Pval_FDR', 'Pval', 'Num_In_Path', 'metabCount', 'geneCount', 'pathCount'].includes(field));
+    } else {
+      return Object.keys(this).filter(field => !['Total_In_Path_Metab', 'Total_In_Path_Gene', 'Pval_combined_Holm', 'Pval_combined_FDR', 'Pval_Metab','Pval_combined', 'Num_In_Path_Metab', 'Num_In_Path_Gene', 'metabCount', 'geneCount', 'pathCount'].includes(field));
+    }
   }
 }