Update tooling to better match other NIU projects

.github/workflows/test_and_deploy.yml

@@ -27,7 +27,7 @@ jobs:
     strategy:
       matrix:
         # Run all supported Python versions on linux
-        python-version: ["3.8", "3.9", "3.10", "3.11"]
+        python-version: ["3.9", "3.10", "3.11"]
         os: [ubuntu-latest]
         # Include one windows and macos run
         include:

.pre-commit-config.yaml

@@ -1,8 +1,8 @@
+exclude: 'conf.py'
+# Configuring https://pre-commit.ci/ bot
+ci:
+    autoupdate_schedule: monthly
 repos:
-    - repo: https://github.com/pycqa/isort
-      rev: 5.12.0
-      hooks:
-          - id: isort
     - repo: https://github.com/pre-commit/pre-commit-hooks
       rev: v4.4.0
       hooks:
@@ -15,17 +15,23 @@ repos:
             args: [--fix=lf]
           - id: requirements-txt-fixer
           - id: trailing-whitespace
-    - repo: https://github.com/charliermarsh/ruff-pre-commit
-      rev: v0.0.238
+    - repo: https://github.com/astral-sh/ruff-pre-commit
+      rev: v0.0.291
       hooks:
         - id: ruff
     - repo: https://github.com/psf/black
-      rev: 22.12.0
+      rev: 23.9.1
       hooks:
           - id: black
     - repo: https://github.com/pre-commit/mirrors-mypy
-      rev: v0.991
+      rev: v1.5.1
       hooks:
           - id: mypy
             additional_dependencies:
                 - types-setuptools
+    - repo: https://github.com/mgedmin/check-manifest
+      rev: "0.49"
+      hooks:
+          - id: check-manifest
+            args: [--no-build-isolation]
+            additional_dependencies: [setuptools-scm]

README.md

@@ -2,9 +2,9 @@
 [![PyPI](https://img.shields.io/pypi/v/fancylog.svg)](https://pypi.org/project/fancylog)
 [![Downloads](https://pepy.tech/badge/fancylog)](https://pepy.tech/project/fancylog)
 [![Wheel](https://img.shields.io/pypi/wheel/fancylog.svg)](https://pypi.org/project/fancylog)
-[![Development Status](https://img.shields.io/pypi/status/fancylog.svg)](https://github.com/adamltyson/fancylog)
+[![Development Status](https://img.shields.io/pypi/status/fancylog.svg)](https://github.com/neuroinformatics-unit/fancylog)
 [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/python/black)
-[![Contributions](https://img.shields.io/badge/Contributions-Welcome-brightgreen.svg)](https://github.com/adamltyson/fancylog)
+[![Contributions](https://img.shields.io/badge/Contributions-Welcome-brightgreen.svg)](https://github.com/neuroinformatics-unit/fancylog)
 
 # fancylog
 Fancier logging with python.
@@ -33,7 +33,7 @@ pip install fancylog[git]
 
 #### To run example
 ```bash
-git clone https://github.com/adamltyson/fancylog
+git clone https://github.com/neuroinformatics-unit/fancylog
 pip install -e .
 python fancylog/example.py /path/to/output/log/dir
 ```

fancylog/fancylog.py

@@ -120,7 +120,6 @@ def __init__(
         write_variables=True,
         log_header=None,
     ):
-
         self.file = open(file, "w", encoding="utf-8")
         self.program = program
         if write_header:

pyproject.toml

@@ -3,16 +3,14 @@ name = "fancylog"
 authors = [{name = "Adam Tyson", email= "[email protected]"}]
 description = "Fancier logging in Python"
 readme = "README.md"
-requires-python = ">=3.6.0"
+requires-python = ">=3.9.0"
 dynamic = ["version"]
 
 license = {text = "BSD-3-Clause"}
 
 classifiers = [
     "Development Status :: 4 - Beta",
     "Programming Language :: Python",
-    "Programming Language :: Python :: 3",
-    "Programming Language :: Python :: 3.8",
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
@@ -23,23 +21,19 @@ classifiers = [
 dependencies = ["rich"]
 
 [project.urls]
-homepage = "https://github.com/adamltyson/fancylog"
-bug_tracker = "https://github.com/adamltyson/fancylog/issues"
-documentation = "https://github.com/adamltyson/fancylog"
-source_code = "https://github.com/adamltyson/fancylog"
-user_support = "https://github.com/adamltyson/fancylog/issues"
+homepage = "https://github.com/neuroinformatics-unit/fancylog"
+bug_tracker = "https://github.com/neuroinformatics-unit/fancylog/issues"
+documentation = "https://github.com/neuroinformatics-unit/fancylog"
+source_code = "https://github.com/neuroinformatics-unit/fancylog"
+user_support = "https://github.com/neuroinformatics-unit/fancylog/issues"
 
 [project.optional-dependencies]
 dev = [
 	"pytest",
 	"pytest-cov",
 	"coverage",
 	"tox",
-	"black",
-   	"isort",
-    "mypy",
 	"pre-commit",
-	"ruff",
  	"setuptools_scm",
 ]
 
@@ -105,3 +99,23 @@ ignore = [
 [tool.ruff]
 line-length = 79
 exclude = ["__init__.py","build",".eggs"]
+
+
+[tool.tox]
+legacy_tox_ini = """
+[tox]
+envlist = py{39,310,311}
+isolated_build = True
+
+[gh-actions]
+python =
+    3.9: py39
+    3.10: py310
+    3.11: py311
+
+[testenv]
+extras =
+    dev
+commands =
+    pytest -v --color=yes --cov=fancylog --cov-report=xml
+"""