CI #3271
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
56s
pyright
15s
build-docs
/
build
2m 35s
check-docs
39s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
11s
rebuild-docker-image
0s
Annotations
2 errors and 20 warnings
|
pathogen-repo-ci-v0 (ebola)
ENOENT: no such file or directory, lstat '/home/runner/work/_temp/setup-micromamba/micromamba-shell'
|
|
pathogen-repo-ci-v0 (ebola)
The process '/home/runner/micromamba-bin/micromamba' failed with exit code null
|
|
pathogen-repo-ci-v0 (ebola)
No files were found with the provided path: ./pathogen-repo/auspice/
./pathogen-repo/results/
./pathogen-repo/benchmarks/
./pathogen-repo/logs/
./pathogen-repo/.snakemake/log/. No artifacts will be uploaded.
|
|
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
|
|
check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
|
|
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
|
|
pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci-v0 (mumps)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache. More details: Cache already exists. Scope: refs/heads/master, Key: 2025-02-04-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], Version: 939591c2ddcc5f42a9b516a21218e7dd0d7bd1f9aa6ec5a1403b6d9c076f80ee
|
|
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
|
Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
|
coverage
|
169 KB |
|
|
output-avian-flu
|
96.6 KB |
|
|
output-dengue
|
1.16 MB |
|
|
output-lassa
|
1.49 MB |
|
|
output-measles
|
3.88 MB |
|
|
output-mpox
|
12.8 MB |
|
|
output-mumps
|
340 KB |
|
|
output-ncov
|
718 KB |
|
|
output-oropouche
|
507 KB |
|
|
output-rabies
|
4.95 MB |
|
|
output-rsv
|
9.46 MB |
|
|
output-seasonal-cov
|
1.67 MB |
|
|
output-seasonal-flu
|
54.4 KB |
|
|
output-tb
|
5.03 MB |
|
|
output-wnv
|
180 KB |
|
|
output-yellow-fever
|
2.11 MB |
|
|
output-zika
|
746 KB |
|