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Merge pull request #187 from maxulysse/fix_tests
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Fix tests
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maxulysse authored Aug 24, 2023
2 parents d779e91 + 5073409 commit 604949b
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Showing 2 changed files with 6 additions and 4 deletions.
5 changes: 2 additions & 3 deletions conf/test.config
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,6 @@ params {

// Input data
input = 'https://raw.githubusercontent.com/nf-core/test-datasets/fetchngs/sra_ids_test.csv'
}

// Load test_data.config for nf-tests
includeConfig 'test_data.config'
schema_ignore_params = 'fastq_ftp_ids,genomes,merge_samplesheet_ids,test_data,test_data_base'
}
5 changes: 4 additions & 1 deletion nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -159,7 +159,10 @@ profiles {
executor.cpus = 16
executor.memory = 60.GB
}
test { includeConfig 'conf/test.config' }
test {
includeConfig 'conf/test.config'
includeConfig 'conf/test_data.config'
}
test_synapse { includeConfig 'conf/test_synapse.config' }
test_full { includeConfig 'conf/test_full.config' }
}
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