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Post-release version bump to 1.1.5dev #317

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Nov 8, 2023
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12 changes: 11 additions & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,16 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v1.1.5dev - [unreleased]

### `Added`

### `Fixed`

### `Dependencies`

### `Deprecated`

## v1.1.4 - [2023-11-07]

### `Added`
Expand All @@ -20,7 +30,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
| ------------- | ---------------- | ----------- |
| AMRFinderPlus | 3.10.42 | 3.11.18 |
| Bakta | 1.7.0 | 1.8.2 |
| MultiQC | 1.14 | 1.15 |
| MultiQC | 1.14 | 1.15 |

### `Deprecated`

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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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@@ -1,7 +1,7 @@
report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/funcscan/releases/tag/1.1.4" target="_blank">nf-core/funcscan</a>
This report has been generated by the <a href="https://github.com/nf-core/funcscan/releases/tag/dev" target="_blank">nf-core/funcscan</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/funcscan/1.1.4/docs/output" target="_blank">documentation</a>.
<a href="https://nf-co.re/funcscan/dev/docs/output" target="_blank">documentation</a>.
report_section_order:
"nf-core-funcscan-methods-description":
order: -1000
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -391,7 +391,7 @@ manifest {
description = """Pipeline for screening for functional components of assembled contigs"""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '1.1.4'
version = '1.1.5dev'
doi = '10.5281/zenodo.7643099'
}

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2 changes: 1 addition & 1 deletion nextflow_schema.json
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Expand Up @@ -311,7 +311,7 @@
},
"annotation_prokka_retaincontigheaders": {
"type": "boolean",
"fa_icon":"fas fa-remove-format",
"fa_icon": "fas fa-remove-format",
"help_text": "This parameter allows prokka to retain the original contig names by activating `PROKKA`'s `--force` flag. If this parameter is set to `false` it activates `PROKKA`'s flags `--locus-tag PROKKA --centre CENTER` so the locus tags (contig names) will be PROKKA_# and the center tag will be CENTER. By default `PROKKA` changes contig headers to avoid errors that might rise due to long contig headers, so this must be turned on if the user has short contig names that should be retained by `PROKKA`. \n\n> Modifies tool parameter(s):\n> - Prokka: `--locus-tag PROKKA --centre CENTER`\n> - Prokka: `--force`",
"description": "Retains contig names."
}
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