Make genomic FASTA input optional #3257
Triggered via pull request
January 21, 2025 18:28
pinin4fjords
Status
Cancelled
Total duration
2m 31s
Artifacts
–
Annotations
42 errors and 2 warnings
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Run tests (modules/local/gtf_filter/tests/main.nf.test docker NF-24.04.2)
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Run tests (tests/salmon.nf.test docker NF-24.04.2)
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Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-24.04.2)
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Run tests (modules/nf-core/salmon/index/tests/main.nf.test docker NF-latest-everything)
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Run tests (modules/local/gtf_filter/tests/main.nf.test docker NF-latest-everything)
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Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything)
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Run tests (tests/min_mapped_reads.nf.test docker NF-24.04.2)
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Run tests (tests/remove_ribo_rna.nf.test docker NF-latest-everything)
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Run tests (tests/hisat2.nf.test docker NF-24.04.2)
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Run tests (tests/default.nf.test docker NF-24.04.2)
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Run tests (tests/star_rsem.nf.test docker NF-latest-everything)
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Run tests (tests/kallisto.nf.test docker NF-24.04.2)
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Run tests (tests/skip_trimming.nf.test docker NF-latest-everything)
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Check for changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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confirm-pass
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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