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Add Pipeline diagram #812

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merged 22 commits into from
Apr 29, 2022
Merged

Add Pipeline diagram #812

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02bf54b
Nip/Tuck version originally drawn by @G-Sarah
jfy133 Apr 26, 2022
b3b1db6
Fix some paths
jfy133 Apr 27, 2022
2f8f069
Update changelog
G-Sarah Apr 27, 2022
7411352
Fixed HiSAT circle
G-Sarah Apr 27, 2022
a4269ab
Update colours and zones
jfy133 Apr 27, 2022
8833aa0
add background
jfy133 Apr 27, 2022
0f5ef34
More padding re-number
jfy133 Apr 27, 2022
ff91810
Fix legend
jfy133 Apr 27, 2022
a86b5bf
Update wording
jfy133 Apr 27, 2022
739dffe
Larger rna-seq logo
jfy133 Apr 27, 2022
c157c86
Align icons change legend text
jfy133 Apr 28, 2022
882e4b9
Update CHANGELOG.md
jfy133 Apr 28, 2022
9356c91
Add diagram to README
jfy133 Apr 28, 2022
8696a3a
Merge branch 'pipeline-diagram' of github.com:jfy133/nf-core-rnaseq i…
jfy133 Apr 28, 2022
1c779e2
Update CHANGELOG.md
drpatelh Apr 28, 2022
6e6cb91
Merge branch 'dev' into pipeline-diagram
drpatelh Apr 28, 2022
13458d9
Resize background
jfy133 Apr 28, 2022
d5f0133
Resize background
jfy133 Apr 28, 2022
9b432d4
Fixed pipeline's starting point to fit the lines' width
G-Sarah Apr 28, 2022
3df3b1e
Clarified input/output
G-Sarah Apr 28, 2022
b293138
Tweak label alignments
jfy133 Apr 29, 2022
690c38d
Merge branch 'dev' into pipeline-diagram
G-Sarah Apr 29, 2022
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -583,6 +583,7 @@ Major novel changes include:
- HiSAT index build now requests `200GB` memory, enough to use the exons / splice junction option for building.
- Added documentation about the `--hisatBuildMemory` option.
- BAM indices are stored and re-used between processes [#71](https://github.com/nf-core/rnaseq/issues/71)
- Added a metro map diagram for the pipeline [#809](https://github.com/nf-core/rnaseq/issues/809)
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Wrong section? Needs to be at the top.


### Bug Fixes

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Binary file added docs/images/pipeline_diagram_grey.png
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