Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Non-updated lint tip message #1259

Closed
jfy133 opened this issue Aug 9, 2021 · 1 comment
Closed

Non-updated lint tip message #1259

jfy133 opened this issue Aug 9, 2021 · 1 comment
Labels
bug Something isn't working

Comments

@jfy133
Copy link
Member

jfy133 commented Aug 9, 2021

Description of the bug

Linting with files applicable for auto-fixing gives the following message:

Tip: Some of these linting errors can automatically be resolved with the following command:

    nf-core lint . --fix files_unchanged

However the . declaration has been removed in the latest version of nf-core tools, and so the command errors

Error: Got unexpected extra argument (.)

Steps to reproduce

Modify a template file (e.g. .github/CONTRIBUTING.md, and run lint command

Expected behaviour

Update message to remove .

System

  • nf-core tools version: 2.1

Additional context
@jfy133 jfy133 added the bug Something isn't working label Aug 9, 2021
@ErikDanielsson ErikDanielsson mentioned this issue Aug 9, 2021
Merged
4 tasks
@ErikDanielsson
Copy link
Contributor

Closing due to the merge of #1263.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@jfy133 @ErikDanielsson