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Refactor nf-core modules commands#1124

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ErikDanielsson merged 12 commits intonf-core:devnf-core/tools:devfrom ErikDanielsson:refactor-module-commandsErikDanielsson/tools:refactor-module-commandsCopy head branch name to clipboardJun 28, 2021

+474-424

Commits

Commits on Jun 23, 2021

• Moved code for commands into their own files

  ErikDanielsson

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  f5beba0

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• Update main with new command classes

  ErikDanielsson

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  35c9fff

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• bug fix

  ErikDanielsson

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  f980f87

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• Move prompt function to install.py

  ErikDanielsson

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  82430cb

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• Fix failing tests

  ErikDanielsson

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  b8472e1

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• Merge branch 'dev' of https://github.com/nf-core/tools into refactor-module-commands

  ErikDanielsson

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  5dff819

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• Update import

  ErikDanielsson

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• changelog

  ErikDanielsson

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Commits on Jun 24, 2021

• Implement suggestions from Kevin

  ErikDanielsson

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  2c4241f

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• Stop execution if user tries to install/remove module in clone of nf-core/modules

  ErikDanielsson

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  b11b423

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• Fix failing test

  ErikDanielsson

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  9af4486

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Commits on Jun 26, 2021

• Remove sys.exit

  ErikDanielsson

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  c1dce02

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