TEST: Fix plugin invocation, use an initializer that can be verified #880
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Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## master #880 +/- ##
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- Coverage 70.54% 70.52% -0.03%
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Files 87 87
Lines 8202 8203 +1
Branches 949 949
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- Hits 5786 5785 -1
- Misses 2409 2411 +2
Partials 7 7 ☔ View full report in Codecov by Sentry. |
mgxd
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Jul 18, 2024
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| _process_initializer=touch_file, | ||
| file_path=init_flag, |
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niworkflows/niworkflows/engine/plugin.py
Lines 449 to 454 in 1dc0327
We should really document somewhere _process_initializer's expected signature - I got burned by this.
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1.11.0 (July 31, 2024) New minor release to start the 1.11.x series. The major changes include: - a deprecation to T1w-only based template processing - addition of a new dependency ``acres`` for accessing package data However, this is still backwards compatible with the 1.10.x series. * MAINT: Depend on acres for data access * ENH: Add PrepareDerivative/SaveDerivative interfaces (#885) * ENH: Make template dimensions support T2w as well (#879) * ENH: Modify FSSource to output T2 (#868) * FIX: Set cal_max in the NIfTI header for visualization after ``IntensityClip`` (#878) * FIX: Remove accidental MRIQC dependency, allow app config to be passed to workflow plugin (#876) * TEST: Fix plugin invocation, use an initializer that can be verified (#880)
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Follow-up to #876, which didn't actually test what we wanted it to. We were manually calling
print()inside the test and interpreting that as being run on process initialization. We need to pass the config toMultiProcPlugin(), notworkflow.run().capsysdoes not capture stdout from subprocesses, it seems, so instead I'm telling the subprocesses to touch a file that I choose.