Integration tests

feat(update): `--toml` flag to upgrade packages in lux.toml #1679

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Run time

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Job	Run time
test (ubuntu-24.04, lua51)	3m 45s
test (ubuntu-24.04, lua52)	3m 51s
test (ubuntu-24.04, lua53)	3m 46s
test (ubuntu-24.04, lua54)	3m 42s
test (ubuntu-24.04, luajit)	3m 46s
test (macos-14, lua51)	4m 6s
test (macos-14, lua52)	4m 41s
test (macos-14, lua53)	3m 55s
test (macos-14, lua54)	4m 25s
test (macos-14, luajit)	3m 52s
	39m 49s