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  • mgatk-lite Public

    Python MIT License Updated Feb 26, 2025

  • OSCAR Public

    Ollie's Single Cell Analysis for the Romagnani lab (OSCAR)

    Shell 1 Updated Feb 26, 2025

  • bih-cubi-romagnani Public

    Setting up access and working spaces for the Romagnani lab on the BIH-CUBI HPC

    Shell Updated Jan 15, 2025

  • asap_to_kite Public

    Forked from caleblareau/asap_to_kite

    Python script for reformatting ASAP-seq FASTQ files for kite

    Python Updated Dec 3, 2024

  • phd_lab_work Public

    Useful scripts for processing and analysing bioinformatic data during my PhD

    R Updated Nov 16, 2024

  • ood-bih-rstudio-server Public

    Forked from bihealth/ood-bih-rstudio-server

    Ollie's implementation of the BIH-CUBI-HPC OnDemand RStudio server

    Shell MIT License Updated Nov 16, 2024

  • singlecell_atlases Public

    Collection of publicly available single cell RNA and ATAC atlases

    Shell Updated Nov 4, 2024

  • gotcha-slim Public

    Forked from landau-lab/Gotcha

    Lightweight implementation of the Landau lab's GoTChA-seq

    R Other Updated Sep 26, 2024