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Open Problems in Single-Cell Analysis

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https://openproblems.bio

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openproblems openproblems Public

Formalizing and benchmarking open problems in single-cell genomics

Shell 323 81
website website Public

Website hosted at https://openproblems.bio

TeX 4 7

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Showing 10 of 35 repositories

task_cyto_batch_integration Public

openproblems-bio/task_cyto_batch_integration’s past year of commit activity

Shell 1 MIT 1 5 2 Updated Feb 4, 2025
docs Public

openproblems-bio/docs’s past year of commit activity

TeX 1 0 4 1 Updated Feb 4, 2025
openproblems Public
Formalizing and benchmarking open problems in single-cell genomics

openproblems-bio/openproblems’s past year of commit activity

Shell 323 MIT 81 8 (1 issue needs help) 1 Updated Feb 3, 2025
website Public
Website hosted at https://openproblems.bio

openproblems-bio/website’s past year of commit activity

TeX 4 CC-BY-4.0 7 32 (1 issue needs help) 14 Updated Feb 3, 2025
task_grn_inference Public

openproblems-bio/task_grn_inference’s past year of commit activity

Jupyter Notebook 3 MIT 1 0 0 Updated Feb 2, 2025
task_ist_preprocessing Public

openproblems-bio/task_ist_preprocessing’s past year of commit activity

Python 5 MIT 0 1 3 Updated Feb 1, 2025
task_foundation_models Public

openproblems-bio/task_foundation_models’s past year of commit activity

Shell 0 MIT 0 0 1 Updated Jan 30, 2025
task_perturbation_prediction Public
A benchmark on predicting how small molecules change gene expression in different cell types.

openproblems-bio/task_perturbation_prediction’s past year of commit activity

Python 4 MIT 2 4 1 Updated Jan 28, 2025
task_batch_integration Public

openproblems-bio/task_batch_integration’s past year of commit activity

Python 1 MIT 2 4 1 Updated Jan 27, 2025
task_dimensionality_reduction Public

openproblems-bio/task_dimensionality_reduction’s past year of commit activity

Python 0 MIT 1 5 1 Updated Jan 27, 2025

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