Repositories list

• ATGC

  Public
  Python

  •

  MIT License

  •3•3•0•0•Updated Jul 5, 2023Jul 5, 2023

• DeepTCR

  Public
  Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

  Jupyter Notebook

  •

  MIT License

  •40•0•0•0•Updated Feb 15, 2023Feb 15, 2023

• SpatialUMAP

  Public
  SpatialUMAP - UMAP applied to spatially derived feature vectors from segmented single cell imaging data.

  spatial-analysissingle-cellumap

  Python

  •2•2•2•0•Updated May 20, 2021May 20, 2021

• GENIE

  Public
  GENIE-ArtifactFinder

  Python

  •0•0•0•0•Updated Apr 2, 2021Apr 2, 2021

• miRge

  Public
  miRge is a logical, ultrafast, small RNA-seq solution to process samples in a highly multiplexed fashion, resulting in dramatically decreased computational requirements when processing sets of samples in a single run.

  Prolog

  •7•4•1•0•Updated Dec 29, 2017Dec 29, 2017

• ExCYT

  Public
  0•0•0•0•Updated Oct 17, 2017Oct 17, 2017

• vcf2maf

  Public
  Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

  Perl

  •

  Apache License 2.0

  •219•0•0•0•Updated Feb 2, 2017Feb 2, 2017