Repositories list

• ga4gh-dream-challenge

  Public
  code for managing challenge site and data

  HTML

  •

  Apache License 2.0

  •1•0•0•0•Updated Apr 28, 2019Apr 28, 2019

• VarCall_CWL

  Public
  A CWL implementation of a modular GATK Variant Calling pipeline

  variant-callingcwl-workflow

  Shell

  •

  MIT License

  •0•3•0•0•Updated Mar 20, 2019Mar 20, 2019

• h3agwas

  Public
  GWAS Pipeline for H3Africa

  Python

  •66•0•0•0•Updated Dec 12, 2018Dec 12, 2018

• RNA_Assesment

  Public
  This repo is for code developed as part of the exercise

  Roff

  •1•0•0•0•Updated Apr 26, 2018Apr 26, 2018

• H3ABioNet-webinar-series-paper

  Public
  R

  •0•0•0•0•Updated Feb 7, 2018Feb 7, 2018

• mashtree

  Public
  Create a tree using Mash distances

  Perl

  •

  GNU General Public License v3.0

  •25•0•0•0•Updated Dec 4, 2017Dec 4, 2017

• rkmh

  Public
  Classify sequencing reads using MinHash.

  HTML

  •

  MIT License

  •4•0•0•0•Updated Nov 13, 2017Nov 13, 2017

• H3ABionetVCAccreditation

  Public
  This repo contains all codes for the H3ABionet Variant Calling Accreditaiton exercise of CBSB node

  Shell

  •3•2•0•4•Updated Feb 26, 2017Feb 26, 2017

• Mash

  Public
  Fast genome and metagenome distance estimation using MinHash

  C++

  •

  Other

  •90•0•0•0•Updated Feb 7, 2017Feb 7, 2017