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fix INSDC RefSeq note in compliant mode #69
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oschwengers committed Aug 20, 2021
1 parent 3ecd7db commit 40aecdb
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion bakta/io/insdc.py
Original file line number Diff line number Diff line change
Expand Up @@ -120,7 +120,7 @@ def write_insdc(genome, features, genbank_output_path, embl_output_path):
if('ups' in feature): # prevent RefSeq identifiers in INSDC compliant mode
if('ncbi_nrp_id' in feature['ups']):
if(cfg.compliant):
qualifiers['note'] = feature['ups']['ncbi_nrp_id']
qualifiers['note'].append(feature['ups']['ncbi_nrp_id'])
else:
qualifiers['protein_id'] = feature['ups']['ncbi_nrp_id']
if('ips' in feature):
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