bump cmscan check to 1.1.4

oschwengers · Oct 18, 2021 · 95ef71f · 95ef71f
1 parent 505a2ce
commit 95ef71f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bakta/utils.py b/bakta/utils.py
@@ -34,7 +34,7 @@ def print_version(self):
 # List of dependencies: tuples for: min version, max version, tool name & command line parameter, dependency check exclusion options
 DEPENDENCY_TRNASCAN = (Version(2, 0, 6), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('tRNAscan-SE', '-h'), ['--skip-trna'])
 DEPENDENCY_ARAGORN = (Version(1, 2, 38), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('aragorn', '-h'), ['skip-tmrna'])
-DEPENDENCY_CMSCAN = (Version(1, 1, 2), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('cmscan', '-h'), ['--skip-rrna', '--skip-ncrna', '--skip-ncrna-region'])
+DEPENDENCY_CMSCAN = (Version(1, 1, 4), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('cmscan', '-h'), ['--skip-rrna', '--skip-ncrna', '--skip-ncrna-region'])
 DEPENDENCY_PILERCR = (Version(1, 6), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('pilercr', '-options'), ['--skip-crispr'])
 DEPENDENCY_PRODIGAL = (Version(2, 6, 3), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('prodigal', '-v'), ['--skip-cds'])
 DEPENDENCY_HMMSEARCH = (Version(3, 3, 1), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, ('hmmsearch', '-h'), ['--skip-cds', '--skip-sorf'])