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Pseudo genes in GenBank break user protein import #94

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oschwengers opened this issue Jan 31, 2022 · 1 comment
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Pseudo genes in GenBank break user protein import #94

oschwengers opened this issue Jan 31, 2022 · 1 comment
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CDS that are annotated as /pseudo (of course) don't provide a translated aa sequences via the /translation qualifier and thus lead to an error if provided via --proteins.
@oschwengers oschwengers added the bug Something isn't working label Jan 31, 2022
@oschwengers oschwengers self-assigned this Jan 31, 2022
oschwengers added a commit that referenced this issue Jan 31, 2022
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fix user provided pseudo genes in GenBank files #94
0f0165d
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fixed in https://github.com/oschwengers/bakta/releases/tag/v1.3.1

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