Introduce auxiliary scripts #251
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This is a merger of a region extraction script I wrote some time ago and #246 - thanks @AhmedElsherbini ;-) |
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Often, the usage of Bakta is a necessary upfront task followed by deeper analyses implemented in custom scripts.
Therefore, we introduce a new directory scripts where we'd like to collect & offer a pool of scripts addressing common tasks.
As a starter:
collect-annotation-stats.py: Collect annotation stats for a cohort of genomes and print a condensedTSV.extract-region.py: Extract genome features within a given genomic range and export them asGFF3,Embl,Genbank,FAAandFFNOf course, pull requests are welcome ;-)