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@overture-stack

Overture

A collection of open-source, extendable solutions for big-data genomic science.
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Open-source genomics data platforms

We build software that enables researchers and the public to access, manage and study large amounts of genomics data.

Central to our work is Overture, our suite of open-source & freely available modular software microservices. Each service has been generalized with narrow responsibilities that combine to form powerful data platforms where researchers can organize, share and explore their genomics data.

By sharing these tools we aim to promote the growth and development of reliable genomic data management systems quickly, flexibly, and at multiple scales.

Demo Portal

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  1. arranger arranger Public

    Data portal API and component generation

    JavaScript 30 25

  2. stage stage Public

    TypeScript 4

  3. SONG SONG Public

    Metadata management and automated validation system

    Java 11 4

  4. score score Public

    Secure Cloud Object REsource: file transfer microservice

    Java 18 10

  5. maestro maestro Public

    Indexing software to connect SONG and Arranger through Elasticsearch

    Java

  6. ego ego Public

    OAuth 2.0 authorization service that supports multiple OpenID identity providers

    Java 26 14

Repositories

Showing 10 of 41 repositories
  • conductor Public
    overture-stack/conductor’s past year of commit activity
    Shell 2 1 3 1 Updated Feb 7, 2025
  • lectern Public

    Data Schema / Dictionary management system

    overture-stack/lectern’s past year of commit activity
    TypeScript 0 AGPL-3.0 2 24 (2 issues need help) 4 Updated Feb 7, 2025
  • .github Public
    overture-stack/.github’s past year of commit activity
    MDX 0 0 0 0 Updated Feb 7, 2025
  • maestro Public

    Indexing software to connect SONG and Arranger through Elasticsearch

    overture-stack/maestro’s past year of commit activity
    Java 0 AGPL-3.0 0 23 4 Updated Feb 7, 2025
  • SONG Public

    Metadata management and automated validation system

    overture-stack/SONG’s past year of commit activity
    Java 11 AGPL-3.0 4 103 (3 issues need help) 2 Updated Feb 7, 2025
  • arranger Public

    Data portal API and component generation

    overture-stack/arranger’s past year of commit activity
    JavaScript 30 AGPL-3.0 25 58 16 Updated Feb 7, 2025
  • charts-server Public

    Web server to store and serve Overture.bio Helm charts.

    overture-stack/charts-server’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 6, 2025
  • helm-charts Public

    repository to keep helm charts for the overture different projects

    overture-stack/helm-charts’s past year of commit activity
    Mustache 0 1 3 3 Updated Feb 6, 2025
  • stage Public
    overture-stack/stage’s past year of commit activity
    TypeScript 0 AGPL-3.0 4 22 2 Updated Feb 5, 2025
  • sqon-builder Public

    Toolkit for generating/manipulating Overture SQON filter objects

    overture-stack/sqon-builder’s past year of commit activity
    TypeScript 0 AGPL-3.0 0 2 2 Updated Feb 2, 2025

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