Update continuous integration environment #563
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WalkthroughThis pull request removes multiple GitHub Actions workflows and introduces a new unified pipeline. Removed workflows included those for running benchmarks, code formatting (Black), unit tests (including various configurations such as minimal, MPI, Flux, Windows, and legacy), static type checks (MyPy), pip dependency checks, and notebook testing. The new pipeline consolidates all these CI/CD tasks into one workflow triggered on pushes to the main branch and pull requests, streamlining the automated testing, code quality, and deployment process without altering public interfaces. Changes
Sequence Diagram(s)sequenceDiagram
participant U as User/PR Event
participant C as CI Pipeline
U->>C: Trigger pipeline (push/PR)
C->>C: Run Black check
alt Formatting fails
C->>C: Run Black fix
end
C->>C: Run MyPy check
C->>C: Run Minimal unit tests
C->>C: Run Pip dependency check
C->>C: Run Benchmark tests
C->>C: Run Notebook tests
C->>C: Run extended unit tests (MPI, Flux, Windows, Legacy)
C->>C: Trigger Autobot for PR auto-merge
C-->>U: Report results
Poem
📜 Recent review detailsConfiguration used: CodeRabbit UI 📒 Files selected for processing (1)
✅ Files skipped from review due to trivial changes (1)
⏰ Context from checks skipped due to timeout of 90000ms (14)
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Actionable comments posted: 1
🧹 Nitpick comments (2)
.github/workflows/pipeline.yml (2)
143-171: Adjust YAML indentation in the notebooks job steps.
A static analysis warning indicates an indentation issue on line 147 — the list item is indented with 6 spaces rather than the expected 4 spaces.Proposed modification:
- - uses: actions/checkout@v4 + - uses: actions/checkout@v4Ensure consistency across the other steps in this block as well.
🧰 Tools
🪛 YAMLlint (1.35.1)
[warning] 147-147: wrong indentation: expected 4 but found 6
(indentation)
371-383: Adjust YAML indentation and end-of-file formatting in the autobot job.
There are two points to address in this section:
- Line 379 has an indentation issue—the list item is indented with 6 spaces instead of the expected 4 spaces.
Proposed diff:
- - name: Enable auto-merge for bot PRs + - name: Enable auto-merge for bot PRs
- Line 383 is missing a newline at the end of the file.
Please add a newline at the end to comply with best practices.
🧰 Tools
🪛 YAMLlint (1.35.1)
[warning] 379-379: wrong indentation: expected 4 but found 6
(indentation)
[error] 383-383: no new line character at the end of file
(new-line-at-end-of-file)
📜 Review details
Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro
📒 Files selected for processing (14)
.github/workflows/benchmark.yml(0 hunks).github/workflows/black.yml(0 hunks).github/workflows/format_black.yml(0 hunks).github/workflows/minimal.yml(0 hunks).github/workflows/mypy.yml(0 hunks).github/workflows/notebooks.yml(0 hunks).github/workflows/pipeline.yml(1 hunks).github/workflows/pypicheck.yml(0 hunks).github/workflows/unittest-flux-mpich.yml(0 hunks).github/workflows/unittest-flux-openmpi.yml(0 hunks).github/workflows/unittest-mpich.yml(0 hunks).github/workflows/unittest-openmpi.yml(0 hunks).github/workflows/unittest-win.yml(0 hunks).github/workflows/unittests-old.yml(0 hunks)
💤 Files with no reviewable changes (13)
- .github/workflows/black.yml
- .github/workflows/mypy.yml
- .github/workflows/unittests-old.yml
- .github/workflows/unittest-win.yml
- .github/workflows/format_black.yml
- .github/workflows/benchmark.yml
- .github/workflows/unittest-openmpi.yml
- .github/workflows/pypicheck.yml
- .github/workflows/minimal.yml
- .github/workflows/notebooks.yml
- .github/workflows/unittest-flux-openmpi.yml
- .github/workflows/unittest-flux-mpich.yml
- .github/workflows/unittest-mpich.yml
🧰 Additional context used
🪛 YAMLlint (1.35.1)
.github/workflows/pipeline.yml
[warning] 48-48: wrong indentation: expected 4 but found 6
(indentation)
[warning] 147-147: wrong indentation: expected 4 but found 6
(indentation)
[warning] 379-379: wrong indentation: expected 4 but found 6
(indentation)
[error] 383-383: no new line character at the end of file
(new-line-at-end-of-file)
⏰ Context from checks skipped due to timeout of 90000ms (6)
- GitHub Check: unittest_openmpi (ubuntu-latest, 3.12)
- GitHub Check: unittest_win
- GitHub Check: unittest_openmpi (macos-latest, 3.13)
- GitHub Check: unittest_mpich (macos-latest, 3.13)
- GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-mpich.yml)
- GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-openmpi.yml)
🔇 Additional comments (13)
.github/workflows/pipeline.yml (13)
1-2: Pipeline name and trigger definition are clear.
The workflow’s name ("Pipeline") and trigger configuration (push to main and pull_request events) are defined correctly.
3-7: CI trigger configuration looks appropriate.
The push and pull_request triggers are set up as expected to cover relevant events for continuous integration.
8-17: Job "black" configuration is correctly structured.
The job uses a recent checkout action and the stable psf/black action with check mode and diff options; this matches the objective of enforcing code style.
18-43: Job "black_fix" is implemented to auto-format code on failure.
The use of "needs: [black]" and checking out the head branch correctly addresses the scenario when formatting is required.
60-81: Job "minimal" is set up properly.
The configuration of the minimal Conda environment and execution of unit tests appears complete and matches the intended pipeline functionality.
82-101: Job "pip_check" is configured correctly.
The steps install dependencies and run pip check as expected.
102-142: Job "benchmark" is well configured.
The matrix strategy across operating systems and environment files is set appropriately to run various benchmark scripts.
172-202: Job "unittest_flux_mpich" is configured appropriately.
The steps for extending the environment and executing tests are clear and align with the new CI structure.
203-238: Job "unittest_flux_openmpi" is set up correctly.
The configuration and test execution commands appear correct and consistent with the pipeline objectives.
240-280: Job "unittest_mpich" is implemented well.
The matrix strategy across different operating systems and Python versions is comprehensive.
281-321: Job "unittest_openmpi" configuration is thorough.
The test setup uses the appropriate setup action and environment file along with a proper matrix configuration.
322-344: Job "unittest_win" configuration is accurate for Windows testing.
The steps for setting up the Conda environment and running unit tests on Windows are correctly defined.
345-370: Job "unittest_old" correctly maintains backward compatibility testing.
The environment variables and test steps ensure that legacy configurations are validated.
| steps: | ||
| - name: Setup Python |
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🛠️ Refactor suggestion
Correct YAML indentation in the mypy job.
Static analysis indicates that the list item under "steps:" in the mypy job is indented with 6 spaces while 4 spaces are expected.
Suggested change:
- - name: Setup Python
+ - name: Setup PythonPlease review and adjust the indentation for all items in this block consistently.
📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| steps: | |
| - name: Setup Python | |
| steps: | |
| - name: Setup Python |
🧰 Tools
🪛 YAMLlint (1.35.1)
[warning] 48-48: wrong indentation: expected 4 but found 6
(indentation)
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