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1. VMD_zalign VMD_zalign Public

   A VMD script to align a membrane protein using RMSD alignment along Z axis only

   1

2. Pymol-script-repo Pymol-script-repo Public

   Forked from Pymol-Scripts/Pymol-script-repo

   Collected scripts for Pymol

   Python

3. alphafold alphafold Public

   Forked from google-deepmind/alphafold

   Open source code for AlphaFold.

   Python

4. Enhanced_Sampling_Methods_Tutorials Enhanced_Sampling_Methods_Tutorials Public

   Forked from NNairIITK/Enhanced_Sampling_Methods_Tutorials

   Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..

   Shell

5. freeenergy freeenergy Public

   Forked from samuelymei/freeenergy

   Jupyter Notebook

6. ddpm-ipa-protein-generation ddpm-ipa-protein-generation Public

   Forked from lucidrains/ddpm-ipa-protein-generation

   Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabi…

   Python