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Fixes #102
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hadley committed Sep 26, 2022
1 parent d9e5e2c commit 9b9aa80
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98 changes: 29 additions & 69 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
@@ -1,10 +1,14 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow is overkill for most R packages and
# check-standard.yaml is likely a better choice.
# usethis::use_github_action("check-standard") will install it.
on:
push:
branches:
- master
branches: [main, master]
pull_request:
branches:
- master
branches: [main, master]

name: R-CMD-check

Expand All @@ -18,83 +22,39 @@ jobs:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'devel'}
- {os: macOS-latest, r: 'release'}

- {os: windows-latest, r: 'release'}
- {os: ubuntu-16.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.5', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.4', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.3', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
# Use 3.6 to trigger usage of RTools35
- {os: windows-latest, r: '3.6'}

- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
- {os: ubuntu-latest, r: 'oldrel-2'}
- {os: ubuntu-latest, r: 'oldrel-3'}
- {os: ubuntu-latest, r: 'oldrel-4'}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
_R_CHECK_FORCE_SUGGESTS_: false
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-pandoc@master
- uses: r-lib/actions/setup-r@v2
with:
pandoc-version: '2.11.2'

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
- uses: r-lib/actions/setup-r-dependencies@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}

- name: Session info
run: |
options(width = 100)
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
shell: Rscript {0}

- name: Check
env:
_R_CHECK_CRAN_INCOMING_: false
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}

- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash
extra-packages: any::rcmdcheck
needs: check

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
- uses: r-lib/actions/check-r-package@v2
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
upload-snapshots: true
61 changes: 28 additions & 33 deletions .github/workflows/pkgdown.yaml
Original file line number Diff line number Diff line change
@@ -1,51 +1,46 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches:
- main
- master
branches: [main, master]
pull_request:
branches: [main, master]
release:
types: [published]
workflow_dispatch:

name: pkgdown

jobs:
pkgdown:
runs-on: macOS-latest
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@v1
- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-pandoc@v1

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v2
- uses: r-lib/actions/setup-r@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
use-public-rspm: true

- name: Install magick (can be removed once magick binary available)
run: brew install imagemagick@6
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website

- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
install.packages("pkgdown", type = "binary")
- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}

- name: Install package
run: R CMD INSTALL .

- name: Deploy package
run: |
git config --local user.email "[email protected]"
git config --local user.name "GitHub Actions"
Rscript -e 'pkgdown::deploy_to_branch(new_process = FALSE)'
- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs
58 changes: 43 additions & 15 deletions .github/workflows/pr-commands.yaml
Original file line number Diff line number Diff line change
@@ -1,51 +1,79 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
issue_comment:
types: [created]

name: Commands

jobs:
document:
if: startsWith(github.event.comment.body, '/document')
if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/document') }}
name: document
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master

- uses: r-lib/actions/pr-fetch@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)'

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::roxygen2
needs: pr-document

- name: Document
run: Rscript -e 'roxygen2::roxygenise()'
run: roxygen2::roxygenise()
shell: Rscript {0}

- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add man/\* NAMESPACE
git commit -m 'Document'
- uses: r-lib/actions/pr-push@master
- uses: r-lib/actions/pr-push@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}

style:
if: startsWith(github.event.comment.body, '/style')
if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/style') }}
name: style
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master

- uses: r-lib/actions/pr-fetch@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-r@v2

- name: Install dependencies
run: Rscript -e 'install.packages("styler")'
run: install.packages("styler")
shell: Rscript {0}

- name: Style
run: Rscript -e 'styler::style_pkg()'
run: styler::style_pkg()
shell: Rscript {0}

- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add \*.R
git commit -m 'Style'
- uses: r-lib/actions/pr-push@master
- uses: r-lib/actions/pr-push@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
43 changes: 12 additions & 31 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -1,50 +1,31 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches:
- master
branches: [main, master]
pull_request:
branches:
- master
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master
- uses: r-lib/actions/setup-r@v2
with:
pandoc-version: '2.11.2'

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
use-public-rspm: true

- name: Cache R packages
uses: actions/cache@v1
- uses: r-lib/actions/setup-r-dependencies@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("covr")
remotes::install_local()
hugodown::hugo_install("0.72.0")
shell: Rscript {0}
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: covr::codecov()
run: covr::codecov(quiet = FALSE)
shell: Rscript {0}
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@

<!-- badges: start -->
[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://www.tidyverse.org/lifecycle/#experimental)
[![R build status](https://github.com/r-lib/hugodown/workflows/R-CMD-check/badge.svg)](https://github.com/r-lib/hugodown/actions)
[![R-CMD-check](https://github.com/r-lib/hugodown/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-lib/hugodown/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/r-lib/hugodown/branch/master/graph/badge.svg)](https://codecov.io/gh/r-lib/hugodown?branch=master)
<!-- badges: end -->

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