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[BUG] PageRank Values Miscalculated with Float Weights #1330

Closed
andyjulin-bby opened this issue Jan 12, 2021 · 4 comments
Closed

[BUG] PageRank Values Miscalculated with Float Weights #1330

andyjulin-bby opened this issue Jan 12, 2021 · 4 comments
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@Iroy30
Labels
bug Something isn't working
Milestone
0.18

Comments

@andyjulin-bby
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Describe the bug
When using cugraph.pagerank on a graph initialized with float values for the edge_attr parameter, the returned values are well outside the [0, 1] range expected by the PageRank calculation (often by many orders of magnitude). If the underlying values are instead of int type, the calculation works as expected. The function is currently supposed to ignore the weights column for the calculation, so it seems to purely be a bug.

Steps/Code to reproduce bug

import cudf
import cugraph
import numpy as np

data = np.array([[0, 4], [1, 0], [2, 0], [3, 1], [3, 2], [4, 2], [4, 3]])

def calc_pagerank(data, weight_val, alpha=0.85, max_iter=500, tol=1e-5):
    df = cudf.DataFrame(data, columns=['src', 'dst'])
    df['weights'] = weight_val  # Assign `dtype` to column

    g = cugraph.DiGraph()
    g.from_cudf_edgelist(df, 'src', 'dst', edge_attr='weights')  # <--- Issue when `edge_attr` is `float` type

    return cugraph.pagerank(g, alpha=alpha, max_iter=max_iter, tol=tol).sort_values('vertex')

calc_pagerank(data, 1.0)  # Using float weights

Output:

	pagerank	vertex
2	-4.211153e-12	0
3	1.635755e+00	1
4	-7.098591e-38	2
0	8.222820e+05	3
1	1.520391e+00	4

Expected behavior
The returned PageRank values should all be in [0, 1], and presumably match when the weights are 1 and 1.0.

calc_pagerank(data, 1)  # Using int weights

Output:

 	pagerank	vertex
2	0.284126	0
3	0.091791	1
4	0.207182	2
0	0.145391	3
1	0.271510	4

Environment overview (please complete the following information)

  • Environment location: [Docker]
  • Method of cuGraph install: [Docker]
docker pull rapidsai/rapidsai:cuda11.0-runtime-ubuntu18.04-py3.7

docker run --gpus all --rm -it -p 8888:8888 -p 8787:8787 -p 8786:8786 \
    rapidsai/rapidsai:cuda11.0-runtime-ubuntu18.04-py3.7

Environment details
Please run and paste the output of the cugraph/print_env.sh script here, to gather any other relevant environment details

Click here to see environment details
     
     **git***
     print_env.sh: 10: [: true: unexpected operator
     Not inside a git repository

 ***OS Information***
 DISTRIB_ID=Ubuntu
 DISTRIB_RELEASE=18.04
 DISTRIB_CODENAME=bionic
 DISTRIB_DESCRIPTION="Ubuntu 18.04.5 LTS"
 NAME="Ubuntu"
 VERSION="18.04.5 LTS (Bionic Beaver)"
 ID=ubuntu
 ID_LIKE=debian
 PRETTY_NAME="Ubuntu 18.04.5 LTS"
 VERSION_ID="18.04"
 HOME_URL="https://www.ubuntu.com/"
 SUPPORT_URL="https://help.ubuntu.com/"
 BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
 PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
 VERSION_CODENAME=bionic
 UBUNTU_CODENAME=bionic
 Linux 9316ab0fed03 3.10.0-1127.19.1.el7.x86_64 #1 SMP Tue Aug 25 17:23:54 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux
 
 ***GPU Information***
 Tue Jan 12 17:31:17 2021       
 +-----------------------------------------------------------------------------+
 | NVIDIA-SMI 450.51.06    Driver Version: 450.51.06    CUDA Version: 11.0     |
 |-------------------------------+----------------------+----------------------+
 | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
 | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
 |                               |                      |               MIG M. |
 |===============================+======================+======================|
 |   0  Tesla V100-SXM2...  Off  | 00000000:06:00.0 Off |                    0 |
 | N/A   35C    P0    55W / 300W |   9017MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   1  Tesla V100-SXM2...  Off  | 00000000:07:00.0 Off |                    0 |
 | N/A   35C    P0    43W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   2  Tesla V100-SXM2...  Off  | 00000000:0A:00.0 Off |                    0 |
 | N/A   33C    P0    42W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   3  Tesla V100-SXM2...  Off  | 00000000:0B:00.0 Off |                    0 |
 | N/A   31C    P0    43W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   4  Tesla V100-SXM2...  Off  | 00000000:85:00.0 Off |                    0 |
 | N/A   30C    P0    44W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   5  Tesla V100-SXM2...  Off  | 00000000:86:00.0 Off |                    0 |
 | N/A   33C    P0    43W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   6  Tesla V100-SXM2...  Off  | 00000000:89:00.0 Off |                    0 |
 | N/A   34C    P0    42W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 |   7  Tesla V100-SXM2...  Off  | 00000000:8A:00.0 Off |                    0 |
 | N/A   31C    P0    44W / 300W |      3MiB / 32510MiB |      0%      Default |
 |                               |                      |                  N/A |
 +-------------------------------+----------------------+----------------------+
 
 +-----------------------------------------------------------------------------+
 | Processes:                                                                  |
 |  GPU   GI   CI        PID   Type   Process name                  GPU Memory |
 |        ID   ID                                                   Usage      |
 |=============================================================================|
 +-----------------------------------------------------------------------------+
 
 ***CPU***
 Architecture:        x86_64
 CPU op-mode(s):      32-bit, 64-bit
 Byte Order:          Little Endian
 CPU(s):              80
 On-line CPU(s) list: 0-79
 Thread(s) per core:  2
 Core(s) per socket:  20
 Socket(s):           2
 NUMA node(s):        2
 Vendor ID:           GenuineIntel
 CPU family:          6
 Model:               79
 Model name:          Intel(R) Xeon(R) CPU E5-2698 v4 @ 2.20GHz
 Stepping:            1
 CPU MHz:             2780.078
 CPU max MHz:         3600.0000
 CPU min MHz:         1200.0000
 BogoMIPS:            4390.14
 Virtualization:      VT-x
 L1d cache:           32K
 L1i cache:           32K
 L2 cache:            256K
 L3 cache:            51200K
 NUMA node0 CPU(s):   0-19,40-59
 NUMA node1 CPU(s):   20-39,60-79
 Flags:               fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch epb cat_l3 cdp_l3 invpcid_single intel_ppin intel_pt ssbd ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm rdt_a rdseed adx smap xsaveopt cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts spec_ctrl intel_stibp flush_l1d
 
 ***CMake***
 /opt/conda/envs/rapids/bin/cmake
 cmake version 3.17.0
 
 CMake suite maintained and supported by Kitware (kitware.com/cmake).
 
 ***g++***
 /usr/local/bin/g++
 g++ (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0
 Copyright (C) 2017 Free Software Foundation, Inc.
 This is free software; see the source for copying conditions.  There is NO
 warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 
 
 ***nvcc***
 /usr/local/cuda/bin/nvcc
 nvcc: NVIDIA (R) Cuda compiler driver
 Copyright (c) 2005-2019 NVIDIA Corporation
 Built on Wed_Oct_23_19:24:38_PDT_2019
 Cuda compilation tools, release 10.2, V10.2.89
 
 ***Python***
 /opt/conda/envs/rapids/bin/python
 Python 3.7.8
 
 ***Environment Variables***
 PATH                            : /opt/conda/envs/rapids/bin:/opt/conda/condabin:/opt/conda/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
 LD_LIBRARY_PATH                 : /usr/local/nvidia/lib:/usr/local/nvidia/lib64:/usr/local/cuda/lib64:/usr/local/lib:/opt/conda/envs/rapids/lib
 NUMBAPRO_NVVM                   : 
 NUMBAPRO_LIBDEVICE              : 
 CONDA_PREFIX                    : /opt/conda/envs/rapids
 PYTHON_PATH                     : 
 
 ***conda packages***
 conda is /opt/conda/envs/rapids/bin/conda
 /opt/conda/envs/rapids/bin/conda
 # packages in environment at /opt/conda/envs/rapids:
 #
 # Name                    Version                   Build  Channel
 _libgcc_mutex             0.1                 conda_forge    conda-forge
 _openmp_mutex             4.5                      1_llvm    conda-forge
 abseil-cpp                20200225.2           he1b5a44_2    conda-forge
 absl-py                   0.10.0           py37hc8dfbb8_1    conda-forge
 aiohttp                   3.6.3            py37h8f50634_0    conda-forge
 alabaster                 0.7.12                     py_0    conda-forge
 appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
 argon2-cffi               20.1.0           py37h8f50634_2    conda-forge
 arrow-cpp                 1.0.1           py37hd1d2865_14_cuda    conda-forge
 arrow-cpp-proc            2.0.0                      cuda    conda-forge
 asn1crypto                1.4.0              pyh9f0ad1d_0    conda-forge
 astor                     0.8.1              pyh9f0ad1d_0    conda-forge
 async-timeout             3.0.1                   py_1000    conda-forge
 async_generator           1.10                       py_0    conda-forge
 atk                       2.36.0                        3    conda-forge
 atk-1.0                   2.36.0               h63f31ab_3    conda-forge
 attrs                     20.2.0             pyh9f0ad1d_0    conda-forge
 autoconf                  2.69            pl526h14c3975_9    conda-forge
 automake                  1.16.2                  pl526_1    conda-forge
 aws-c-common              0.4.59               he1b5a44_0    conda-forge
 aws-c-event-stream        0.1.6                h84e28f3_5    conda-forge
 aws-checksums             0.1.9                he252421_2    conda-forge
 aws-sam-translator        1.27.0             pyh9f0ad1d_0    conda-forge
 aws-sdk-cpp               1.8.63               h9b98462_0    conda-forge
 aws-xray-sdk              0.95                       py_0    conda-forge
 awscli                    1.18.181                 pypi_0    pypi
 babel                     2.8.0                      py_0    conda-forge
 backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
 backports                 1.0                        py_2    conda-forge
 backports.functools_lru_cache 1.6.1                      py_0    conda-forge
 backports.tempfile        1.0                        py_0    conda-forge
 backports.weakref         1.0.post1       py37hc8dfbb8_1002    conda-forge
 beautifulsoup4            4.9.3              pyhb0f4dca_0    conda-forge
 benchmark                 1.5.1                he1b5a44_2    conda-forge
 black                     19.10b0                    py_4    conda-forge
 blas                      1.0                         mkl    conda-forge
 bleach                    3.2.1              pyh9f0ad1d_0    conda-forge
 blinker                   1.4                        py_1    conda-forge
 bokeh                     2.2.2            py37hc8dfbb8_0    conda-forge
 boost                     1.72.0           py37h48f8a5e_1    conda-forge
 boost-cpp                 1.72.0               h8e57a91_0    conda-forge
 boto                      2.49.0                     py_0    conda-forge
 boto3                     1.16.0             pyh9f0ad1d_0    conda-forge
 botocore                  1.19.21                  pypi_0    pypi
 brotli                    1.0.9                he1b5a44_2    conda-forge
 brotlipy                  0.7.0           py37hb5d75c8_1001    conda-forge
 bzip2                     1.0.8                h516909a_3    conda-forge
 c-ares                    1.16.1               h516909a_3    conda-forge
 ca-certificates           2020.6.20            hecda079_0    conda-forge
 cachetools                4.1.1                      py_0    conda-forge
 cairo                     1.16.0            hcf35c78_1003    conda-forge
 certifi                   2020.6.20        py37he5f6b98_2    conda-forge
 cffi                      1.14.3           py37h00ebd2e_1    conda-forge
 cfitsio                   3.470                hce51eda_7    conda-forge
 cfn-lint                  0.38.0           py37hc8dfbb8_0    conda-forge
 chardet                   3.0.4           py37he5f6b98_1008    conda-forge
 clang                     8.0.1                hc9558a2_2    conda-forge
 clang-tools               8.0.1                hc9558a2_2    conda-forge
 clangxx                   8.0.1                         2    conda-forge
 click                     7.1.2              pyh9f0ad1d_0    conda-forge
 click-plugins             1.1.1                      py_0    conda-forge
 cligj                     0.6.0              pyh9f0ad1d_0    conda-forge
 cloudpickle               1.6.0                      py_0    conda-forge
 clx                       0.16.0a0+290.gbf31048.dirty          pypi_0    pypi
 cmake                     3.17.0               h28c56e5_0    conda-forge
 cmake_setuptools          0.1.3                      py_0    rapidsai-nightly
 cmarkgfm                  0.4.2            py37h8f50634_3    conda-forge
 colorama                  0.4.3                    pypi_0    pypi
 colorcet                  2.0.1                      py_0    conda-forge
 commonmark                0.9.1                      py_0    conda-forge
 conda                     4.8.3            py37hc8dfbb8_1    conda-forge
 conda-build               3.20.3           py37hc8dfbb8_0    conda-forge
 conda-package-handling    1.7.2            py37hb5d75c8_0    conda-forge
 conda-verify              3.1.1           py37hc8dfbb8_1002    conda-forge
 cookies                   2.2.1                      py_0    conda-forge
 coverage                  5.3              py37h8f50634_1    conda-forge
 cryptography              3.1.1            py37hff6837a_1    conda-forge
 cudatashader              0.1                      pypi_0    pypi
 cudatoolkit               10.2.89              h6bb024c_0    nvidia
 cudf                      0+untagged.1.ga6296e3          pypi_0    pypi
 cudf-kafka                0+untagged.1.ga6296e3          pypi_0    pypi
 cudf_kafka                0.16.0          py37_g2b8298f566_0    rapidsai
 cudnn                     7.6.5                cuda10.2_0  
 cugraph                   0+untagged.1.gf6382fb          pypi_0    pypi
 cuml                      0+untagged.1.g544ec2f          pypi_0    pypi
 cupy                      8.0.0            py37hd9eba22_2    conda-forge
 curl                      7.71.1               he644dc0_8    conda-forge
 cusignal                  0+untagged.1.gc3c9d71          pypi_0    pypi
 cuspatial                 0+untagged.1.g487b88f          pypi_0    pypi
 custreamz                 0.16.0          py37_g2b8298f566_0    rapidsai
 cuxfilter                 0+untagged.1.g468968d          pypi_0    pypi
 cycler                    0.10.0                     py_2    conda-forge
 cyrus-sasl                2.1.27               h063b49f_1    conda-forge
 cython                    0.29.21          py37hb892b2f_1    conda-forge
 cytoolz                   0.11.0           py37h8f50634_1    conda-forge
 dask                      2.30.0                     py_0    conda-forge
 dask-core                 2.30.0                     py_0    conda-forge
 dask-cuda                 0.17.0a201103           py37_30    rapidsai-nightly
 dask-cudf                 0+untagged.1.ga6296e3          pypi_0    pypi
 dask-glm                  0.2.0                      py_1    conda-forge
 dask-labextension         3.0.0                      py_0    conda-forge
 dask-ml                   1.7.0                      py_0    conda-forge
 datashader                0.11.1             pyh9f0ad1d_0    conda-forge
 datashape                 0.5.4                      py_1    conda-forge
 dbus                      1.13.6               h7a60e0d_1    conda-forge
 decorator                 4.4.2                      py_0    conda-forge
 defusedxml                0.6.0                      py_0    conda-forge
 deprecated                1.2.10                   pypi_0    pypi
 distributed               2.30.0           py37hc8dfbb8_1    conda-forge
 dlpack                    0.3                  he1b5a44_1    conda-forge
 docker-py                 4.3.1            py37hc8dfbb8_1    conda-forge
 docker-pycreds            0.4.0                      py_0    conda-forge
 docutils                  0.15.2                   pypi_0    pypi
 double-conversion         3.1.5                he1b5a44_2    conda-forge
 doxygen                   1.8.20               h0e019cf_0    conda-forge
 ecdsa                     0.13                       py_0    conda-forge
 elasticsearch             7.10.0                   pypi_0    pypi
 elasticsearch-async       6.2.0                    pypi_0    pypi
 elasticsearch-dsl         7.3.0                    pypi_0    pypi
 entrypoints               0.3             py37hc8dfbb8_1002    conda-forge
 expat                     2.2.9                he1b5a44_2    conda-forge
 faiss-proc                1.0.0                      cuda    rapidsai-nightly
 fastavro                  1.0.0.post1      py37h8f50634_1    conda-forge
 fastrlock                 0.5              py37h3340039_1    conda-forge
 feather-format            0.4.1              pyh9f0ad1d_0    conda-forge
 filelock                  3.0.12             pyh9f0ad1d_0    conda-forge
 filterpy                  1.4.5                      py_1    conda-forge
 fiona                     1.8.13           py37h0492a4a_1    conda-forge
 flake8                    3.8.4                      py_0    conda-forge
 flask                     1.1.2              pyh9f0ad1d_0    conda-forge
 flatbuffers               1.10.0            hf484d3e_1002    conda-forge
 font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
 font-ttf-inconsolata      2.001                hab24e00_0    conda-forge
 font-ttf-source-code-pro  2.030                hab24e00_0    conda-forge
 font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
 fontconfig                2.13.1            h86ecdb6_1001    conda-forge
 fonts-conda-ecosystem     1                             0    conda-forge
 fonts-conda-forge         1                             0    conda-forge
 freetype                  2.10.4               he06d7ca_0    conda-forge
 freexl                    1.0.5             h516909a_1002    conda-forge
 fribidi                   1.0.10               h516909a_0    conda-forge
 fsspec                    0.8.4                      py_0    conda-forge
 ftfy                      5.8                      pypi_0    pypi
 future                    0.18.2           py37hc8dfbb8_2    conda-forge
 gast                      0.4.0              pyh9f0ad1d_0    conda-forge
 gcsfs                     0.7.1                      py_0    conda-forge
 gdal                      3.0.4           py37h4b180d9_10    conda-forge
 gdk-pixbuf                2.38.2               h3f25603_4    conda-forge
 gdown                     3.12.2                   pypi_0    pypi
 gensim                    3.8.3                    pypi_0    pypi
 geopandas                 0.8.1                      py_0    conda-forge
 geos                      3.8.1                he1b5a44_0    conda-forge
 geotiff                   1.6.0                h05acad5_0    conda-forge
 gettext                   0.19.8.1          hf34092f_1004    conda-forge
 gflags                    2.2.2             he1b5a44_1004    conda-forge
 giflib                    5.2.1                h516909a_2    conda-forge
 git                       2.29.0          pl5262he3b78ea_0    conda-forge
 glib                      2.66.1               he1b5a44_1    conda-forge
 glob2                     0.7                        py_0    conda-forge
 glog                      0.4.0                h49b9bf7_3    conda-forge
 gmock                     1.10.0                        4    conda-forge
 gmp                       6.2.0                he1b5a44_3    conda-forge
 gobject-introspection     1.66.1           py37h98f159f_2    conda-forge
 google-api-core           1.23.0                   pypi_0    pypi
 google-auth               1.22.0                     py_0    conda-forge
 google-auth-oauthlib      0.4.1                      py_2    conda-forge
 google-cloud-core         1.4.4                    pypi_0    pypi
 google-cloud-storage      1.32.0                   pypi_0    pypi
 google-crc32c             1.0.0                    pypi_0    pypi
 google-pasta              0.2.0              pyh8c360ce_0    conda-forge
 google-resumable-media    1.1.0                    pypi_0    pypi
 googleapis-common-protos  1.52.0                   pypi_0    pypi
 gperftools                2.7                  h767d802_2    conda-forge
 gpuci-tools               0.2.1                         5    gpuci
 graphite2                 1.3.13            he1b5a44_1001    conda-forge
 graphviz                  2.42.3               h6939c30_2    conda-forge
 grpc-cpp                  1.32.0               h7997a97_1    conda-forge
 grpcio                    1.33.2           py37haffed2e_2    conda-forge
 gst-plugins-base          1.14.5               h0935bb2_2    conda-forge
 gstreamer                 1.14.5               h36ae1b5_2    conda-forge
 gtest                     1.10.0               hc9558a2_4    conda-forge
 gtk2                      2.24.32              h586f36d_1    conda-forge
 gts                       0.7.6                h17b2bb4_1    conda-forge
 h5py                      2.10.0          nompi_py37hf7afa78_105    conda-forge
 harfbuzz                  2.4.0                h9f30f68_3    conda-forge
 hdf4                      4.2.13            hf30be14_1003    conda-forge
 hdf5                      1.10.6          nompi_h54c07f9_1110    conda-forge
 heapdict                  1.0.1                      py_0    conda-forge
 holoviews                 1.13.4             pyh9f0ad1d_0    conda-forge
 httpretty                 1.0.2                      py_0    conda-forge
 hyperopt                  0.2.5                    pypi_0    pypi
 hypothesis                5.37.4                     py_0    conda-forge
 icu                       64.2                 he1b5a44_1    conda-forge
 idna                      2.8                   py37_1000    conda-forge
 imagesize                 1.2.0                      py_0    conda-forge
 importlib-metadata        2.0.0                      py_1    conda-forge
 importlib_metadata        2.0.0                         1    conda-forge
 iniconfig                 1.1.0              pyh9f0ad1d_0    conda-forge
 ipykernel                 5.3.4            py37hc6149b9_1    conda-forge
 ipython                   7.15.0           py37hc8dfbb8_0    conda-forge
 ipython_genutils          0.2.0                      py_1    conda-forge
 ipywidgets                7.5.1              pyh9f0ad1d_1    conda-forge
 isort                     5.0.9            py37hc8dfbb8_0    conda-forge
 itsdangerous              1.1.0                      py_0    conda-forge
 janome                    0.4.1                    pypi_0    pypi
 jedi                      0.17.2           py37hc8dfbb8_1    conda-forge
 jeepney                   0.4.3                      py_0    conda-forge
 jinja2                    2.11.2             pyh9f0ad1d_0    conda-forge
 jmespath                  0.10.0             pyh9f0ad1d_0    conda-forge
 joblib                    0.17.0                     py_0    conda-forge
 jpeg                      9d                   h516909a_0    conda-forge
 json-c                    0.13.1            hbfbb72e_1002    conda-forge
 json5                     0.9.5              pyh9f0ad1d_0    conda-forge
 jsondiff                  1.1.2                      py_0    conda-forge
 jsonpatch                 1.24                       py_0    conda-forge
 jsonpickle                1.4.1              pyh9f0ad1d_0    conda-forge
 jsonpointer               2.0                        py_0    conda-forge
 jsonschema                3.2.0                      py_2    conda-forge
 junit-xml                 1.9                pyh9f0ad1d_0    conda-forge
 jupyter-server-proxy      1.5.0                      py_0    conda-forge
 jupyter_client            6.1.7                      py_0    conda-forge
 jupyter_core              4.6.3            py37hc8dfbb8_2    conda-forge
 jupyter_sphinx            0.3.1            py37hc8dfbb8_1    conda-forge
 jupyterlab                2.2.9                      py_0    conda-forge
 jupyterlab-nvdashboard    0.1.11200212              py_12    rapidsai-nightly
 jupyterlab_pygments       0.1.2              pyh9f0ad1d_0    conda-forge
 jupyterlab_server         1.2.0                      py_0    conda-forge
 kealib                    1.4.13               h33137a7_1    conda-forge
 keras                     2.3.1                    py37_0    conda-forge
 keras-applications        1.0.8                      py_1    conda-forge
 keras-preprocessing       1.1.0                      py_0    conda-forge
 keyring                   21.4.0           py37hc8dfbb8_2    conda-forge
 kiwisolver                1.2.0            py37h99015e2_1    conda-forge
 krb5                      1.17.1               hfafb76e_3    conda-forge
 lapack                    3.6.1                ha44fe06_2    conda-forge
 lcms2                     2.11                 hbd6801e_0    conda-forge
 ld_impl_linux-64          2.35                 h769bd43_9    conda-forge
 libarchive                3.4.3                hf837322_0    conda-forge
 libblas                   3.8.0                    20_mkl    conda-forge
 libcblas                  3.8.0                    20_mkl    conda-forge
 libcudf                   0.16.0          cuda10.2_g2b8298f566_0    rapidsai
 libcudf_kafka             0.16.0a201022   g2cda39b341_1979    rapidsai-nightly
 libcumlprims              0.16.0a200930   cuda10.2_g1c28023_35    rapidsai-nightly
 libcurl                   7.71.1               hcdd3856_8    conda-forge
 libcypher-parser          0.6.2                         1    rapidsai-nightly
 libdap4                   3.20.6               h1d1bd15_1    conda-forge
 libedit                   3.1.20191231         he28a2e2_2    conda-forge
 libev                     4.33                 h516909a_1    conda-forge
 libevent                  2.1.10               hcdb4288_3    conda-forge
 libfaiss                  1.6.3           he61ee18_3_cuda    conda-forge
 libffi                    3.2.1             he1b5a44_1007    conda-forge
 libgcc-ng                 7.5.0               h5dbcf3e_17    conda-forge
 libgcrypt                 1.8.4             hf484d3e_1000    conda-forge
 libgdal                   3.0.4               he6a97d6_10    conda-forge
 libgfortran               3.0.0                         1    conda-forge
 libgfortran-ng            7.5.0               hae1eefd_17    conda-forge
 libgfortran4              7.5.0               hae1eefd_17    conda-forge
 libglib                   2.66.1               h0dae87d_1    conda-forge
 libgpg-error              1.39                 he1b5a44_0    conda-forge
 libgpuarray               0.7.6             h14c3975_1003    conda-forge
 libgsasl                  1.8.0                         2    conda-forge
 libhwloc                  2.3.0                h3c4fd83_0    conda-forge
 libiconv                  1.16                 h516909a_0    conda-forge
 libkml                    1.3.0             hd79254b_1012    conda-forge
 liblapack                 3.8.0                    20_mkl    conda-forge
 liblief                   0.10.1               he1b5a44_2    conda-forge
 libllvm10                 10.0.1               he513fc3_3    conda-forge
 libllvm8                  8.0.1                hc9558a2_0    conda-forge
 libnetcdf                 4.7.4           nompi_h84807e1_105    conda-forge
 libnghttp2                1.41.0               h8cfc5f6_2    conda-forge
 libntlm                   1.4               h516909a_1002    conda-forge
 libopenblas               0.3.10          pthreads_hb3c22a3_5    conda-forge
 libpng                    1.6.37               hed695b0_2    conda-forge
 libpq                     12.3                 h5513abc_2    conda-forge
 libprotobuf               3.13.0.1             h8b12597_0    conda-forge
 librdkafka                1.5.0                h40bdf00_0    conda-forge
 librmm                    0.16.0          cuda10.2_g1bcc7b1_0    rapidsai
 libsodium                 1.0.18               h516909a_1    conda-forge
 libspatialindex           1.9.3                he1b5a44_3    conda-forge
 libspatialite             4.3.0a            h2482549_1038    conda-forge
 libssh2                   1.9.0                hab1572f_5    conda-forge
 libstdcxx-ng              7.5.0               h2ae2ef3_17    conda-forge
 libthrift                 0.13.0               h5aa387f_6    conda-forge
 libtiff                   4.1.0                hc7e4089_6    conda-forge
 libtool                   2.4.6             hebb1f50_1006    conda-forge
 libutf8proc               2.5.0                h516909a_2    conda-forge
 libuuid                   2.32.1            h14c3975_1000    conda-forge
 libuv                     1.34.0               h516909a_0    conda-forge
 libwebp                   1.1.0                h56121f0_4    conda-forge
 libwebp-base              1.1.0                h516909a_3    conda-forge
 libxcb                    1.13              h14c3975_1002    conda-forge
 libxml2                   2.9.10               hee79883_0    conda-forge
 lightgbm                  3.0.0            py37h3340039_1    conda-forge
 llvm-openmp               11.0.0               hfc4b9b4_1    conda-forge
 llvmlite                  0.34.0           py37h5202443_2    conda-forge
 locket                    0.2.0                      py_2    conda-forge
 lz4-c                     1.9.2                he1b5a44_3    conda-forge
 lzo                       2.10              h516909a_1000    conda-forge
 m4                        1.4.18            h516909a_1001    conda-forge
 make                      4.3                  hd18ef5c_1    conda-forge
 mako                      1.1.3              pyh9f0ad1d_0    conda-forge
 markdown                  3.3.2              pyh9f0ad1d_0    conda-forge
 markupsafe                1.1.1            py37hb5d75c8_2    conda-forge
 matplotlib                3.3.2            py37hc8dfbb8_1    conda-forge
 matplotlib-base           3.3.2            py37hc9afd2a_1    conda-forge
 mccabe                    0.6.1                      py_1    conda-forge
 mimesis                   4.0.0              pyh9f0ad1d_0    conda-forge
 mistune                   0.8.4           py37h8f50634_1002    conda-forge
 mkl                       2020.2                      256    conda-forge
 mock                      4.0.2            py37hc8dfbb8_1    conda-forge
 mockito                   1.2.2                    pypi_0    pypi
 more-itertools            8.5.0                      py_0    conda-forge
 moto                      1.3.14                     py_0    conda-forge
 mpld3                     0.3                      pypi_0    pypi
 msgpack-python            1.0.0            py37h99015e2_2    conda-forge
 multidict                 4.7.5            py37h8f50634_2    conda-forge
 multipledispatch          0.6.0                      py_0    conda-forge
 munch                     2.5.0                      py_0    conda-forge
 mypy                      0.782                      py_0    conda-forge
 mypy_extensions           0.4.3            py37hc8dfbb8_2    conda-forge
 nbclient                  0.5.1                      py_0    conda-forge
 nbconvert                 6.0.7            py37hc8dfbb8_1    conda-forge
 nbformat                  5.0.8                      py_0    conda-forge
 nbsphinx                  0.7.1              pyh9f0ad1d_0    conda-forge
 nccl                      2.7.8.1              hc6a2c23_1    conda-forge
 ncurses                   6.2                  he1b5a44_2    conda-forge
 nest-asyncio              1.4.1                      py_0    conda-forge
 networkx                  2.5                        py_0    conda-forge
 ninja                     1.10.1               hfc4b9b4_2    conda-forge
 nltk                      3.4.4                      py_0    conda-forge
 nodejs                    13.13.0              hf5d1a2b_0    conda-forge
 notebook                  6.1.4            py37hc8dfbb8_1    conda-forge
 numba                     0.51.2           py37h9fdb41a_0    conda-forge
 numpy                     1.19.4                   pypi_0    pypi
 numpydoc                  1.1.0                      py_1    conda-forge
 nvtx                      0.2.1            py37h8f50634_2    conda-forge
 oauthlib                  3.0.1                      py_0    conda-forge
 olefile                   0.46               pyh9f0ad1d_1    conda-forge
 openjdk                   8.0.152              h7b6447c_3  
 openjpeg                  2.3.1                h981e76c_3    conda-forge
 openssl                   1.1.1h               h516909a_0    conda-forge
 orc                       1.6.5                hd3605a7_0    conda-forge
 packaging                 20.4               pyh9f0ad1d_0    conda-forge
 pandas                    1.1.3            py37hb33c840_2    conda-forge
 pandoc                    1.19.2                        0    conda-forge
 pandocfilters             1.4.2                      py_1    conda-forge
 panel                     0.9.7                      py_0    conda-forge
 pango                     1.42.4               h7062337_4    conda-forge
 param                     1.9.3                      py_0    conda-forge
 parquet-cpp               1.5.1                         2    conda-forge
 parso                     0.7.1              pyh9f0ad1d_0    conda-forge
 partd                     1.1.0                      py_0    conda-forge
 patchelf                  0.11                 he1b5a44_0    conda-forge
 pathspec                  0.8.0              pyh9f0ad1d_0    conda-forge
 patsy                     0.5.1                      py_0    conda-forge
 pcre                      8.44                 he1b5a44_0    conda-forge
 perl                      5.26.2            h516909a_1006    conda-forge
 pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
 pickle5                   0.0.11           py37h8f50634_0    conda-forge
 pickleshare               0.7.5                   py_1003    conda-forge
 pillow                    8.0.0            py37h718be6c_0    conda-forge
 pip                       20.2.4                     py_0    conda-forge
 pixman                    0.38.0            h516909a_1003    conda-forge
 pkg-config                0.29.2            h516909a_1008    conda-forge
 pkginfo                   1.6.0              pyh9f0ad1d_0    conda-forge
 pluggy                    0.13.1           py37hc8dfbb8_3    conda-forge
 poppler                   0.87.0               h4190859_1    conda-forge
 poppler-data              0.4.9                         1    conda-forge
 postgresql                12.3                 h8573dbc_2    conda-forge
 proj                      7.0.0                h966b41f_5    conda-forge
 prometheus_client         0.8.0              pyh9f0ad1d_0    conda-forge
 prompt-toolkit            3.0.8                      py_0    conda-forge
 protobuf                  3.13.0.1         py37h3340039_1    conda-forge
 psutil                    5.7.2            py37hb5d75c8_1    conda-forge
 pthread-stubs             0.4               h14c3975_1001    conda-forge
 ptyprocess                0.6.0                   py_1001    conda-forge
 py                        1.9.0              pyh9f0ad1d_0    conda-forge
 py-cpuinfo                7.0.0              pyh9f0ad1d_0    conda-forge
 py-lief                   0.10.1           py37hb892b2f_2    conda-forge
 pyarrow                   1.0.1           py37h5b20ac3_14_cuda    conda-forge
 pyasn1                    0.4.8                      py_0    conda-forge
 pyasn1-modules            0.2.7                      py_0    conda-forge
 pycodestyle               2.6.0              pyh9f0ad1d_0    conda-forge
 pycosat                   0.6.3           py37hb5d75c8_1005    conda-forge
 pycparser                 2.20               pyh9f0ad1d_2    conda-forge
 pyct                      0.4.6                      py_0    conda-forge
 pyct-core                 0.4.6                      py_0    conda-forge
 pydeck                    0.4.1              pyh9f0ad1d_0    conda-forge
 pyee                      7.0.4              pyh9f0ad1d_0    conda-forge
 pyflakes                  2.2.0              pyh9f0ad1d_0    conda-forge
 pygments                  2.7.1                      py_0    conda-forge
 pygpu                     0.7.6           py37h161383b_1002    conda-forge
 pyjwt                     1.7.1                      py_0    conda-forge
 pynvml                    8.0.4                      py_1    conda-forge
 pyopenssl                 19.1.0                     py_1    conda-forge
 pyparsing                 2.4.7              pyh9f0ad1d_0    conda-forge
 pyppeteer                 0.2.2                      py_1    conda-forge
 pyproj                    2.6.1.post1      py37h34dd122_0    conda-forge
 pyqt                      5.9.2            py37hcca6a23_4    conda-forge
 pyrsistent                0.17.3           py37h8f50634_1    conda-forge
 pysocks                   1.7.1            py37he5f6b98_2    conda-forge
 pytest                    6.1.2            py37h89c1867_0    conda-forge
 pytest-asyncio            0.12.0           py37hc8dfbb8_2    conda-forge
 pytest-benchmark          3.2.3              pyh9f0ad1d_0    conda-forge
 pytest-cov                2.10.1             pyh9f0ad1d_0    conda-forge
 pytest-timeout            1.4.2              pyh9f0ad1d_0    conda-forge
 python                    3.7.8           h6f2ec95_1_cpython    conda-forge
 python-confluent-kafka    1.5.0            py37h8f50634_0    conda-forge
 python-dateutil           2.8.1                      py_0    conda-forge
 python-jose               3.1.0              pyh9f0ad1d_0    conda-forge
 python-libarchive-c       2.9              py37he5f6b98_2    conda-forge
 python-louvain            0.13                       py_0    conda-forge
 python-whois              0.7.2                      py_0    rapidsai
 python_abi                3.7                     1_cp37m    conda-forge
 pytorch                   1.6.0           py3.7_cuda10.2.89_cudnn7.6.5_0    pytorch
 pytz                      2020.1             pyh9f0ad1d_0    conda-forge
 pyviz_comms               0.7.6              pyh9f0ad1d_0    conda-forge
 pyyaml                    5.3.1            py37hb5d75c8_1    conda-forge
 pyzmq                     19.0.2           py37hac76be4_2    conda-forge
 qt                        5.9.7                h0c104cb_3    conda-forge
 rapidjson                 1.1.0             he1b5a44_1002    conda-forge
 re2                       2020.10.01           he1b5a44_0    conda-forge
 readline                  8.0                  he28a2e2_2    conda-forge
 readme_renderer           27.0               pyh9f0ad1d_0    conda-forge
 recommonmark              0.6.0                      py_0    conda-forge
 regex                     2020.10.15       py37h8f50634_0    conda-forge
 requests                  2.24.0             pyh9f0ad1d_0    conda-forge
 requests-oauthlib         1.3.0              pyh9f0ad1d_0    conda-forge
 requests-toolbelt         0.9.1                      py_0    conda-forge
 responses                 0.12.0             pyh9f0ad1d_0    conda-forge
 rfc3986                   1.4.0              pyh9f0ad1d_0    conda-forge
 rhash                     1.3.6             h516909a_1001    conda-forge
 ripgrep                   12.1.1               h516909a_1    conda-forge
 rmm                       0.16.0          cuda_10.2_py37_g1bcc7b1_0    rapidsai
 rsa                       4.5                      pypi_0    pypi
 rtree                     0.9.4            py37h8526d28_1    conda-forge
 ruamel_yaml               0.15.80         py37hb5d75c8_1003    conda-forge
 s3fs                      0.4.2                      py_0    conda-forge
 s3transfer                0.3.3                      py_3    conda-forge
 sacremoses                0.0.43             pyh9f0ad1d_0    conda-forge
 scikit-learn              0.23.2           py37hddcf8d6_2    conda-forge
 scipy                     1.5.1            py37ha3d9a3c_0    conda-forge
 seaborn                   0.11.0               ha770c72_1    conda-forge
 seaborn-base              0.11.0                     py_0    conda-forge
 secretstorage             3.1.2            py37hc8dfbb8_2    conda-forge
 segtok                    1.5.10                   pypi_0    pypi
 send2trash                1.5.0                      py_0    conda-forge
 sentencepiece             0.1.92                   pypi_0    pypi
 seqeval                   0.0.12                     py_0    conda-forge
 setuptools                49.6.0           py37he5f6b98_2    conda-forge
 shapely                   1.7.1            py37hedb1597_1    conda-forge
 shellcheck                0.7.1                         0    conda-forge
 simpervisor               0.3                        py_1    conda-forge
 sip                       4.19.8          py37hf484d3e_1000    conda-forge
 six                       1.15.0             pyh9f0ad1d_0    conda-forge
 smart-open                4.0.1                    pypi_0    pypi
 snappy                    1.1.8                he1b5a44_3    conda-forge
 snowballstemmer           2.0.0                      py_0    conda-forge
 sortedcontainers          2.2.2              pyh9f0ad1d_0    conda-forge
 soupsieve                 2.0.1                      py_1    conda-forge
 spdlog                    1.7.0                hc9558a2_2    conda-forge
 sphinx                    3.2.1                      py_0    conda-forge
 sphinx-copybutton         0.3.0              pyh9f0ad1d_0    conda-forge
 sphinx-markdown-tables    0.0.14             pyh9f0ad1d_1    conda-forge
 sphinx_rtd_theme          0.5.0              pyh9f0ad1d_0    conda-forge
 sphinxcontrib-applehelp   1.0.2                      py_0    conda-forge
 sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
 sphinxcontrib-htmlhelp    1.0.3                      py_0    conda-forge
 sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
 sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
 sphinxcontrib-serializinghtml 1.1.4                      py_0    conda-forge
 sphinxcontrib-websupport  1.2.4              pyh9f0ad1d_0    conda-forge
 sqlite                    3.33.0               h4cf870e_1    conda-forge
 sqlitedict                1.7.0                    pypi_0    pypi
 sshpubkeys                3.1.0                      py_0    conda-forge
 statsmodels               0.12.0           py37h161383b_1    conda-forge
 streamz                   0.6.0              pyh9f0ad1d_0    conda-forge
 tbb                       2020.2               hc9558a2_0    conda-forge
 tblib                     1.6.0                      py_0    conda-forge
 tensorboard               1.14.0                   py37_0    conda-forge
 tensorflow                1.14.0               h4531e10_0    conda-forge
 tensorflow-base           1.14.0           py37h4531e10_0    conda-forge
 tensorflow-estimator      1.14.0           py37h5ca1d4c_0    conda-forge
 termcolor                 1.1.0                      py_2    conda-forge
 terminado                 0.9.1            py37hc8dfbb8_1    conda-forge
 testpath                  0.4.4                      py_0    conda-forge
 theano                    1.0.3            py37hfc679d8_1    conda-forge
 threadpoolctl             2.1.0              pyh5ca1d4c_0    conda-forge
 tiledb                    1.7.7                h8efa9f0_3    conda-forge
 tk                        8.6.10               hed695b0_1    conda-forge
 tokenizers                0.8.1                    pypi_0    pypi
 toml                      0.10.1             pyh9f0ad1d_0    conda-forge
 toolchain                 2.4.0                         0  
 toolchain_c_linux-64      2.4.0                         0  
 toolchain_cxx_linux-64    2.4.0                         0  
 toolz                     0.11.1                     py_0    conda-forge
 torchvision               0.7.0                py37_cu102    pytorch
 tornado                   6.0.4            py37h8f50634_2    conda-forge
 tqdm                      4.50.2             pyh9f0ad1d_0    conda-forge
 traitlets                 5.0.5                      py_0    conda-forge
 transformers              3.3.1                      py_0    conda-forge
 treelite                  0.93             py37h3340039_2    conda-forge
 treelite-runtime          0.93                     pypi_0    pypi
 twine                     3.2.0            py37hc8dfbb8_1    conda-forge
 typed-ast                 1.4.1            py37h516909a_0    conda-forge
 typing-extensions         3.7.4.3                       0    conda-forge
 typing_extensions         3.7.4.3                    py_0    conda-forge
 tzcode                    2020a                h516909a_0    conda-forge
 ucx                       1.8.1+g6b29558       cuda10.2_0    rapidsai-nightly
 ucx-proc                  1.0.0                       gpu    rapidsai-nightly
 ucx-py                    0.16.0a201020   py37_g6b29558_187    rapidsai-nightly
 umap-learn                0.4.6            py37hc8dfbb8_0    conda-forge
 urllib3                   1.25.11                    py_0    conda-forge
 wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
 webencodings              0.5.1                      py_1    conda-forge
 websocket-client          0.57.0           py37hc8dfbb8_3    conda-forge
 websockets                8.1              py37h8f50634_2    conda-forge
 werkzeug                  1.0.1              pyh9f0ad1d_0    conda-forge
 wget                      3.2                      pypi_0    pypi
 wheel                     0.35.1             pyh9f0ad1d_0    conda-forge
 widgetsnbextension        3.5.1            py37hc8dfbb8_4    conda-forge
 wrapt                     1.12.1           py37h8f50634_1    conda-forge
 xarray                    0.16.1                     py_0    conda-forge
 xerces-c                  3.2.2             h8412b87_1004    conda-forge
 xgboost                   1.3.0-SNAPSHOT           pypi_0    pypi
 xmltodict                 0.12.0                     py_0    conda-forge
 xorg-kbproto              1.0.7             h14c3975_1002    conda-forge
 xorg-libice               1.0.10               h516909a_0    conda-forge
 xorg-libsm                1.2.3             h84519dc_1000    conda-forge
 xorg-libx11               1.6.12               h516909a_0    conda-forge
 xorg-libxau               1.0.9                h14c3975_0    conda-forge
 xorg-libxdmcp             1.1.3                h516909a_0    conda-forge
 xorg-libxext              1.3.4                h516909a_0    conda-forge
 xorg-libxpm               3.5.13               h516909a_0    conda-forge
 xorg-libxrender           0.9.10            h516909a_1002    conda-forge
 xorg-libxt                1.1.5             h516909a_1003    conda-forge
 xorg-renderproto          0.11.1            h14c3975_1002    conda-forge
 xorg-xextproto            7.3.0             h14c3975_1002    conda-forge
 xorg-xproto               7.0.31            h14c3975_1007    conda-forge
 xz                        5.2.5                h516909a_1    conda-forge
 yaml                      0.2.5                h516909a_0    conda-forge
 yarl                      1.5.1                    pypi_0    pypi
 zeromq                    4.3.3                he1b5a44_2    conda-forge
 zict                      2.0.0                    pypi_0    pypi
 zipp                      3.3.1                      py_0    conda-forge
 zlib                      1.2.11            h516909a_1010    conda-forge
 zstd                      1.4.5                h6597ccf_2    conda-forge

@andyjulin-bby andyjulin-bby added ? - Needs Triage Need team to review and classify bug Something isn't working labels Jan 12, 2021
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afender commented Jan 12, 2021

Thanks for reporting this. Sounds like a bug as the current single GPU version should ignore weights. We are looking into it.

One option is to use the new multi-GPU version which uses edge weights if the input graph is weighted. #1313 (comment).
The single GPU variant of this new version should also be accessible at the C++ layer https://github.com/rapidsai/cugraph/blob/branch-0.18/cpp/tests/experimental/pagerank_test.cpp#L251

@afender afender mentioned this issue Jan 12, 2021
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@BradReesWork BradReesWork added this to the 0.18 milestone Jan 12, 2021
@BradReesWork BradReesWork removed the ? - Needs Triage Need team to review and classify label Jan 12, 2021
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afender commented Jan 12, 2021

Also, we are going to connect the upgraded PageRank backend (which accepts weights) to the single-GPU API in this release (0.18). This bug should go away as we do so.
I opened #1331 to track the progress of this effort. Hope that helps!

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Glad to hear it! Thank you for looking into this so quickly.

@afender afender mentioned this issue Feb 1, 2021
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SG Pagerank transition (#1332)
1a71228 
Close #1313 #1331 #1330

Authors:
  - @Iroy30

Approvers:
  - Brad Rees (@BradReesWork)
  - Rick Ratzel (@rlratzel)
  - Alex Fender (@afender)

URL: #1332
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closed by #1332 and #1331

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