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In "Primers and probes calibration vignette" and "Multifactorial multi-plate qPCR analysis example"
Vignette needs ggplot2 loaded to run. For clarity, I might call library(cowplot) in the first code chunk too.
/inst will not exist for someone who has installed the package. There are a few references to files in /inst. Instead, you can use system.file() to find this file like you did at the beginning of the vignette: read_lightcycler_1colour_cq( "../inst/extdata/Edward_qPCR_Nrd1_calibration_2019-02-02_Ct.txt" )
Responding to @kelshmo's review, ropensci/software-review#470 (comment)
In "Primers and probes calibration vignette" and "Multifactorial multi-plate qPCR analysis example"
/inst
will not exist for someone who has installed the package. There are a few references to files in/inst
. Instead, you can usesystem.file()
to find this file like you did at the beginning of the vignette:read_lightcycler_1colour_cq( "../inst/extdata/Edward_qPCR_Nrd1_calibration_2019-02-02_Ct.txt" )
@wolski also raised the point about file paths, so that is a priority. See ropensci/software-review#470 (comment)
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