Autocycler v0.2.0

This release adds new functionality to facilitate manual completion of assemblies:

• New subcommand: autocycler clean which allows for manual removal of sequences when the consensus assembly is not fully resolved.
• Add depth values to consensus_assembly.gfa file (useful for manual cleaning).

Tarballs of pre-built executable binaries are attached:

• Linux:
  • autocycler-linux-x86_64-musl-v0.2.0.tar.gz: Linux systems with x86-64 processors, musl C standard library
  • autocycler-linux-x86_64-gnu-v0.2.0.tar.gz: Linux systems with x86-64 processors, glibc C standard library
  • I recommend trying the musl version first, as it's more portable. However, if you encounter a memory allocation crash, then try the gnu version.
• Macs:
  • autocycler-macos-x86_64-v0.2.0.tar.gz: Macs with x86-64 Intel processors
  • autocycler-macos-aarch64-v0.2.0.tar.gz: Macs with Apple silicon processors

There are also some tarballs with cross-platform supporting files:

• autocycler-documentation-v0.2.0.tar.gz: an HTML copy of the Autocycler docs at the time of release
• autocycler-helper-scripts-v0.2.0.tar.gz: Autocycler's assembly helper scripts

The Autocycler demo data has not changed, so it can be downloaded from the v0.1.0 release.