Merge pull request #112 from saezlab/CD

Docker building via github action

.github/workflows/publish_package_docker.yml

@@ -0,0 +1,32 @@
+name: Publish to Docker
+on:
+  release:
+    types: [published]
+permissions:
+  packages: write
+  contents: read
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      # Add your test steps here if needed...
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ghcr.io/saezlab/publish-packages/game
+          tags: type=sha
+      - name: Login to GHCR
+        uses: docker/login-action@v3
+        with:
+          registry: ghcr.io
+          username: ${{ github.repository_owner }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+      - name: Build container
+        uses: docker/build-push-action@v5
+        with:
+          context: .
+          push: true
+          tags: ${{ steps.meta.outputs.tags }}

Dockerfile

@@ -0,0 +1,3 @@
+FROM quay.io/biocontainers/decoupler:1.5.0--pyhdfd78af_0
+RUN pip install omnipath==1.0.7 pandas==2.0.3
+RUN pip install --upgrade .